Cucurbita moschata (crookneck pumpkin): 111451009
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Entry
111451009 CDS
T05248
Name
(RefSeq) histone deacetylase 19-like isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
cmos03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111451009
03083 Polycomb repressive complex
111451009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111451009
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111451009
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
111451009
HDAC complexes
Sin3A-HDAC complex
111451009
BRAF-HDAC complex
111451009
REST complex
111451009
SHIP complex
111451009
MiDAC complex
111451009
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
111451009
Heterochromatin formation proteins
Other heterochromatin formation proteins
111451009
Chromatin remodeling factors
NuRD complex
111451009
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Peripla_BP_7
Motif
Other DBs
NCBI-GeneID:
111451009
NCBI-ProteinID:
XP_022947000
UniProt:
A0A6J1G563
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
METGGNSLPSGPDGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQ
VFKPVPARDKVLCRFHADDYVAFLKSITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHKVCDIAVNWSGGLHHAKKCEASGFCYVNDIVLAILELLKHYERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDVGYGKGKYYSLNVPLDDGI
DDESYHFLFKPIMGKVMEVFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGMEVDDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNTHQMLEEIQGKLLDYLSRLQHAPSVQFQERPPDTELPEVDEDREDKDERRDPDSDMEV
DDERKPIPSRVKRETVESEIKDPEVNVDSTRGLEKAAAAEATSAKALDIGSLKIEEPGVK
LEETSKQNDQMLP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggagactggaggcaattcattaccatctgggcctgatggcgtgaagaggaaagtcagc
tatttctacgaccctgaggttgggaattactattatgggcaaggtcacccaatgaagccg
catcgcatccgaatgacgcatgcccttctcgctcattatggcttactacagcatatgcag
gttttcaagcctgttcctgctagggacaaagtcctttgcagatttcatgctgatgattat
gtggcgtttcttaaaagcattacccctgaaacgcagcaagatcagctgagacagcttaag
cgcttcaatgtcggtgaggactgtccggtctttgatggcctctactctttttgtcaaact
tatgctggtggatctgttggtggtgctgttaagttaaaccataaggtttgtgatattgct
gtcaattggtctggtgggctacaccatgcgaagaagtgcgaagcttctggattttgttat
gtcaatgatattgttttggcgatactggagctccttaaacattatgagcgtgttttatat
gttgacatcgatatccaccatggagatggtgtggaggaggctttttacacaaccgacagg
gtcatgactgtatcattccacaaatttggagattattttcctggtacaggtgatatacga
gacgttggttatggaaaaggaaagtactactcccttaatgttcctttggatgatggaatt
gatgacgagagctatcatttcttgttcaaacctataatgggaaaagttatggaagttttt
aaacctggagctgttgttctccaatgtggggctgactctctttctggagataggcttgga
tgctttaacttgtcaataaaaggtcatgcagagtgtgttagatatatgagatcattcaat
gtgcctctattgttacttggtgggggtggctacaccatccgtaatgttgctcgctgctgg
tgctatgagacaggagttgcacttgggatggaggttgatgacaaaatgccacaacatgaa
tattacgagtatttcggtcctgattacactctgcatgttgctcccagtaatatggagaac
aaaaatacacaccaaatgttggaagaaatacaggggaagctgcttgattacctctcaagg
cttcagcatgcacccagtgttcagtttcaagaaagacctcctgataccgaactcccagag
gtggatgaagaccgggaggacaaggatgagagacgggatccagattcagatatggaagtt
gatgatgagagaaaacccatcccaagcagagttaaaagagaaacggttgagtctgaaatc
aaagatccggaagttaatgtcgatagtactagaggtttagaaaaagctgcagcagccgag
gctacaagcgcaaaggctttagacataggttctctcaaaatcgaagagccaggcgtaaag
cttgaagaaaccagcaagcagaatgaccaaatgttaccctaa
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integrated database retrieval system
