Cucurbita moschata (crookneck pumpkin): 111451192
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Entry
111451192 CDS
T05248
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111451192
04121 Ubiquitin system [BR:
cmos04121
]
111451192
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111451192
Membrane trafficking [BR:
cmos04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
111451192
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111451192
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-RING-like
Rad50_zn_hook
CxC4
zf-HC5HC2H_2
Prok-RING_4
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
111451192
NCBI-ProteinID:
XP_022947282
UniProt:
A0A6J1G610
LinkDB
All DBs
Position
Unknown
AA seq
378 aa
AA seq
DB search
MASGTASYWCYRCNRFVRAWVQDTISCPYCDGGFVEAIETASSLPAANLHRRFSPSAIHT
LDQDPFQSPRLSTRRSRRRLGDRSTFNPVVVLRGSADGGDEGGGGGENNSFDIYYDDGAG
SGLRPVPATMSEFLMGTGFDRLLEQLAQLEINGFGRSENPPASKAAVESMPTIEILESHV
DSDSHCAVCKEAFEIGTEAREMPCKHIYHSDCIIPWLSMRNSCPVCRHELPSERVSPAGG
VSDRVVDEETVGLTIWRLPGGGFAVGRFTGGRLTGERDPPAVYTEMDGGFNANGAPRRVS
WASRRSRGRENRGIGRTFRNIFSFFGRLRSSNSSSSLASNETESVSRSHSRSSSSVFSRY
LRRPNRTWLENHTENGRW
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggtacggcgtcgtattggtgttaccggtgcaatcgattcgttcgtgcttgg
gttcaagacaccatatcttgtccttactgtgacggtggatttgttgaagcaatcgaaacc
gcgtcttctctcccggcggcgaatctccaccgtcgattctcgccgtctgcgattcacact
ttggatcaagatccgtttcagtctcctcgcttgagcacccggcgaagtcgccgtagactt
ggggatcggtcgacttttaaccctgttgttgttcttcgtggttctgccgacggtggcgat
gagggcggcggtggtggggagaataatagcttcgatatttactatgacgatggtgctggg
tctggtcttcggccggttccggcgacgatgtcggagtttctgatggggactggatttgat
cggttgttggagcagttggctcaactggagatcaacgggtttggcagatctgaaaatccg
ccggcgtcgaaagcagcggtggaatcaatgccgacgattgagattttggaaagtcacgtg
gattcagattcgcactgtgcggtttgtaaagaggcgtttgaaataggaaccgaagcccga
gaaatgccctgtaagcacatatatcactccgattgcataatcccttggctttcgatgaga
aattcctgtccagtctgccgacacgaactgccatcggaacgcgtatctccagccggcggg
gtttcagatcgcgtggtcgacgaagagaccgtagggttaacaatctggagactccctggc
gggggattcgccgttggccgattcaccggcggtagactgaccggcgagagagatccacca
gcggtctacaccgaaatggacggtggattcaatgccaacggagctccgagaagggtctcg
tgggcttcgagaagaagcaggggaagggaaaaccgaggaatcggacgaacattccgtaac
atcttttcttttttcggaagattaaggtcttcgaattcatcttcttctttggcttcgaat
gaaactgaatctgttagtagaagccatagccgttcgagctcttcagtcttcagcagatac
ttgcgaaggccaaacagaacttggctggagaatcatactgaaaatggccgatggtga
DBGET
integrated database retrieval system
