Cucurbita moschata (crookneck pumpkin): 111451738
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Entry
111451738 CDS
T05248
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111451738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111451738
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111451738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
MsrA_helical
IF2_assoc
Motif
Other DBs
NCBI-GeneID:
111451738
NCBI-ProteinID:
XP_022948040
UniProt:
A0A6J1G8K7
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MQTDSGKLFVGGISWDTDEERLKEYFSAFGEVVEAVIMKDRITGRGRGFGFIVFVDPNVA
DRVVREKHNIDGRMVEAKRAVPRNDQNIVGRTSGTINVSPSAGRTKKIFVGGLASTVTES
EFKSYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEDAVDKVLIKTFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGSYGVRMDGRFSPVSSGRS
VFTPFGSGYGMGVNFEIGLNPGYGGASNFANNLNYGRGLSPYYTGNSDRFSNIGFESGNG
GNSSFFSSATQNLWGSGGLNNGSNSANSNAHLGSASGIIGGNAFANSGVNWSSSGISSQA
GGNHIFSNSGSLNYGGVDSGYTLGAGGYGRNSGTVLPPTSSFSTSVGFDGSLADFYSANY
SDPTWGPSNFERDGSGPIGYGLGNAASDVSSRSSPGFIGGQSVNRRQSSRGNTT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactgatagcggcaagttatttgttggtggaatatcttgggatactgatgaagaa
cgtcttaaagagtatttcagtgcctttggtgaggttgtagaagctgtgattatgaaggat
cggatcacaggtcgcggtcgtggcttcggctttattgtttttgttgatccaaatgttgca
gatagagttgtaagggagaagcataatattgatggaagaatggttgaggctaaaagggct
gttcccaggaatgaccagaacattgtaggtagaaccagtggtaccattaatgtttctcct
agtgctggacgaactaaaaagatatttgttgggggcttagcatcgactgttacagagagc
gaattcaagagctattttgatcaatttgggacaattacagatgttgtggtgatgtacgac
cacaatactcttcgacccagaggatttgggtttattacatatgattccgaagacgcagta
gataaggttcttatcaagactttccatgaactgaatggaaaaatggttgaagttaagcgt
gcagttccgaaagagttgtcaccaggtcctagccgtagtccacttggtggatacaattat
ggtcagagtagggtcaatagcttccttaatggttatactcaggggtacagttcgagtaca
attggaagctatggtgttagaatggatggtagatttagtccggtttctagtggtcgaagt
gtattcactccatttggttcaggttatggaatgggagtgaactttgagattggtttaaac
ccggggtacggtggagcttccaattttgccaataatctcaactacgggcggggactgagc
ccgtattatactggtaattctgataggtttagcaacataggttttgaaagtggcaatgga
ggaaactcatccttcttcagctcagcaactcaaaacttgtggggaagtggagggctcaac
aatggttcaaactctgccaattccaatgctcatttgggatcagcaagcggcatcatcgga
ggaaatgcatttgccaattctggagttaactggagtagttctggaatctcgtctcaagcg
ggaggaaatcatatttttagtaactccgggagtctaaattatggaggtgttgacagtggt
tatactcttggagctggagggtatgggaggaacagtggtaccgtcttgcctccaacgtca
tcattttctacctctgttggttttgacgggtccttggccgatttctacagtgctaattac
agtgatcccacgtggggaccttccaattttgaaagagatggatctggacccattggttat
ggacttggcaatgctgcttcagatgtctcatccagaagctctcctggtttcattggtggt
caaagcgttaataggaggcagtcgagcagaggaaacactacctag
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