Cucurbita moschata (crookneck pumpkin): 111451780
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Entry
111451780 CDS
T05248
Name
(RefSeq) transportin-1-like
KO
K18752
transportin-1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111451780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111451780
03009 Ribosome biogenesis [BR:
cmos03009
]
111451780
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111451780
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
111451780
Pre-60S particles
111451780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IPO5
TPR_IMB1
IBN_N
HEAT_2
TOR1L1_N
HEAT_MROH2B_C
TPR_DNAAF5
HEAT_MROH2B_1st
HEAT_Maestro
CLASP_N
UME
Cnd1
PDS5
INTS7_N
Dopey_N
UTP20_N
WHD_Storkhead
Usg
Phage_head_chap
DUF3689
Motif
Other DBs
NCBI-GeneID:
111451780
NCBI-ProteinID:
XP_022948093
UniProt:
A0A6J1G8E6
LinkDB
All DBs
Position
Unknown
AA seq
892 aa
AA seq
DB search
MAASVSWQPQENGFNEICGLLEQQISPSSNADKSQIWQQLQQYSQFPDFNNYLVFILARA
EGKSVEVRQAAGLFLKNNLRNAYKSMSPVFQQYIKSELLPCMGAADRHIRSTVGTIISVV
VQLGGVLGWPELLQALVKCLDSSDQNHMEGAMDALSKICEDIPQVLDSDVPGLSERPINI
FLPRLFQFFQSPHATLRKLSLSSVNQYIMLMPTALYVSMDQYLQGLFVLANDPTSEVRKL
VCQAFVQLIEVRPTFLEPHLRNVIEYMLQVNKDADEEVSLEACEFWSAYCDAQLPPENLR
EFLPHLIPALLSNMVYADDDESLLEAEEEGSLPDREQDLKPRFHSSRLHGSDNAEDDDDD
IVNIWNLRKCSAAALDILSNVFGDEILPILMPIVEVNLSAKGDEAWKEREAAVLALGAIA
EGCINGLYPHLPQIVTFLIPLLDDKFPLIRSISCWTLSRFSKFIVQGIENQKGYEQFDKV
LMGLLRRLLDNNKRVQEAACSAFATLEEEAAEELAPHLENILQHLVCAFGKYQRRNQRIV
YDAIGTLADAVGAELNQPAYLDVLMPPLIAKWQQLSNSDKDLFPLLECFTSIAQALGAGF
AQFAQPVFQRCISIIQTQQMAKVNPASAGVQYDKEFIVCCLDLLSGLAEGLGSGVESLVS
QSNLRDLLLQCCMDEASDVRQSAFALLGDLGRVCHVHLLPRLSEFLTAAAKQLDTPKLKE
IVSVANNACWAIGELAIKVHQEISPVVMTVISSLVPILQHAQELNKSLVENSAITLGRIA
WVCPQLVSPHMEHFMQPWCTALSMIRDDVEKEDAFRGLCALAKSNPSGALSSLAYMCKAI
ASWHEIRSQDLHNEVCQVLHGYKQMLINGGGWDQYISSLEPSVRDKLSKYQV
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgagtgtgtcatggcaacctcaggaaaatgggttcaacgagatctgcggcttg
ctcgagcagcagatttccccttcatcgaatgctgataagtcccagatttggcagcaactt
cagcaatactcgcagtttcctgacttcaataattacctcgtttttattcttgcacgcgct
gagggtaaatcagtcgaggttcgacaagctgcaggcttgtttctgaaaaacaaccttaga
aatgcatacaagtcgatgtctcctgtctttcagcagtatattaaatctgaattgttgccg
tgtatgggagctgctgacagacatatcaggtctacggtcgggaccatcatcagtgttgtt
gttcaactagggggagtattggggtggcctgagttgctgcaagcacttgtaaaatgctta
gacagttcagaccagaatcacatggaaggtgctatggatgctttgtccaagatttgtgaa
gatatacctcaagtgcttgattcggatgtacctggattgtctgaacgcccaatcaacata
tttcttcctagattatttcagttctttcagtctccgcatgctacgttgagaaagctttca
ttgagttctgtgaatcaatacattatgctgatgcccactgctctatatgtatccatggat
cagtatcttcaaggtttatttgttcttgctaatgaccctacgtcagaagtgcgaaagctg
gtttgtcaagcatttgtacagcttattgaagtacgcccaactttcttggagccgcacctg
cgaaatgtaatcgaatacatgttgcaagtcaataaagatgctgatgaggaagtttcactt
gaagcatgtgaattttggtctgcatattgtgatgcccaattacctcccgagaacttaaga
gagttcttgccacatttaattccagcactattgtcaaatatggtttatgctgatgacgat
gaatcacttcttgaggctgaggaagaaggatctcttccagaccgggagcaggatctaaaa
ccccggttccattcgtcaaggttacatggatcagataatgcagaagatgatgatgatgac
attgtgaatatatggaacttgcgcaaatgcagtgctgcagctcttgatattctctcaaat
gtgtttggggatgaaattcttcctatattgatgcccattgttgaggtcaatttatccgca
aaaggtgatgaagcctggaaagaaagggaagctgctgtattggctcttggtgccatagct
gaaggttgcatcaatggactttatcctcatcttccacagattgtcacatttcttattcct
cttttagacgataaatttcctctaataaggagtatatcttgttggacactttctcgtttc
agcaagtttatcgtgcagggcattgagaatcagaaaggctacgaacaatttgataaagtt
ctcatgggacttctacgaagattactggacaacaacaagagggtgcaagaagcagcttgt
tctgcttttgcaacgctggaggaggaagctgcagaggagttggcgccacatttggaaaat
atattacagcacttagtatgtgcctttggaaagtaccagagacggaatcaacggatagtg
tatgatgccattggaaccttagcagatgctgttggagcggagctaaaccagcctgcttat
cttgatgttctcatgccaccattaattgccaaatggcagcaactttcgaactcggacaaa
gatctctttccattgttggaatgcttcacatctatagcacaggctttgggggctggattt
gcccaatttgctcaacctgtgtttcagagatgcataagcatcatccagacccaacaaatg
gcaaaggtcaatcccgcttctgctggggttcaatatgataaagagtttattgtatgctgt
cttgatcttctttcaggacttgcagagggtcttggcagtggggtagaaagtttggtttct
caaagcaatctgagggacttgctcctgcaatgttgcatggatgaagcttctgatgtccga
cagagtgcctttgcattgcttggggatcttggaagagtatgccacgttcatttgctacca
cgtttgtccgaatttcttaccgctgcagcaaagcaactggacactcccaagctgaaggaa
attgtttctgtggctaacaatgcctgctgggcaattggagaattagctattaaggtacac
caagaaatttctccagtcgttatgacagtgatttcaagcttggtcccaattcttcaacat
gcacaggagctaaataaatctctggtagaaaatagtgcaattacacttggaaggattgca
tgggtttgtccgcagcttgtgtcaccacatatggaacatttcatgcaaccatggtgcact
gctttatccatgatacgtgacgatgtagaaaaagaggatgctttccgaggtctttgtgct
ctggctaaatcaaatccgtcaggggcactaagttcacttgcttatatgtgcaaagccatt
gctagttggcatgaaataaggagtcaagatcttcacaatgaagtgtgccaggttctgcat
ggctataaacagatgctgataaatggtggtggatgggaccagtatatttcttctctagaa
ccttctgtgagggacaaactatcgaaatatcaagtatag
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