Cucurbita moschata (crookneck pumpkin): 111451985
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Entry
111451985 CDS
T05248
Name
(RefSeq) transcription elongation factor SPT4 homolog 2
KO
K15171
transcription elongation factor SPT4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111451985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111451985
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111451985
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111451985
RNA polymerase I system
111451985
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
111451985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
PylS_N
Motif
Other DBs
NCBI-GeneID:
111451985
NCBI-ProteinID:
XP_022948256
UniProt:
A0A6J1G8V8
LinkDB
All DBs
Position
Unknown
AA seq
116 aa
AA seq
DB search
MASAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVECTTPNFN
GIISVMDPARSWAARWLRIGRFAPGCYTLAVSEALPEDLQNICEEERVQYAPPKRV
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcgctcctgctcaaattcctaccagtttcgggcacgagctcagagcttgtctt
cgttgtcgtctcgtcaaaacttacgatcagtttcgtgaatcgggctgtgagaattgtccc
ttcttcaagatggacgaagaccacgagcgtgttgtagagtgcactactcctaattttaat
gggataatttctgtcatggatcctgccagaagttgggctgctagatggctgcgaattgga
agatttgcccctggttgttatactctagcagtctcagaggccctccctgaggatttgcag
aatatatgtgaagaggagcgcgtgcaatatgcaccaccaaaacgtgtttga
DBGET
integrated database retrieval system
