Cucurbita moschata (crookneck pumpkin): 111452182
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Entry
111452182 CDS
T05248
Name
(RefSeq) coatomer subunit beta'-2-like
KO
K17302
coatomer subunit beta'
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111452182
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmos04147
]
111452182
Membrane trafficking [BR:
cmos04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111452182
Exosome [BR:
cmos04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111452182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_HPS5
NBCH_WD40
PEP5_VPS11_N
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_DCAF4
WD40_like
Clathrin
WD_LRWD1
Beta-prop_WDR35_TULP_N
TPR_1
PH_SPO71
Motif
Other DBs
NCBI-GeneID:
111452182
NCBI-ProteinID:
XP_022948530
UniProt:
A0A6J1GA43
LinkDB
All DBs
Position
Unknown
AA seq
938 aa
AA seq
DB search
MPLRLAIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQSQIMVKSFEVTELPV
RSAKFIARKQWVVAGADDMLIRVYNYNTMDKMKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPD
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKSSRRVVIGYDEGTIMIKLG
REEPIASMDNSGKIVWAKHNEIQTVNIKSVGADFEVTDGERLPLAVKEMGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSADGEYAVRESTSKIKIFSKNFQ
EKKSIRPTFSAEHIYGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNVYWADSGDLVAI
ASDTSFYILKYNRDAVSSCLDSGRPVDEQGVEDAFELLHEVNERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVVGYTLLLSLIEYKTLVM
RGDYERANEVLPSIPKEHRNSVARFLESRGMIEEALEVATDLDYRFDLAIQLGRLEIAKE
IAVEVQSESKWKQLGELAMSIGKLDMAEECLKYAVDFSGLLLLYSSLGDAQGITQLATLA
KEQGKNNVAFLCLFMLGRLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLNK
VNPKAAESLADPEEYPNLFDDWQVALSVESRATQDRGVFTSAEEYATLADKPYNTLVEAF
RSMQIEGHLENGDIDHEDTEQNGDEQDEHIAEHSGDEQDKHVAEHSGDGQDKHIAEHNGD
ESQEEGEGIVVDADSTDGAVLVNGSEGDEEWGTNTPSA
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagactcgcaatcaagaggaaacttgctcaaaggtcggaaagagtaaaatct
gtagacttgcaccctacagagccatggatactggcaagtctgtattctggaaccgtttgt
atctggaactaccagtctcagattatggttaaatcttttgaggtcaccgagttaccagtc
aggtcggccaaatttatagcacggaagcagtgggttgttgctggagctgatgacatgctt
attcgtgtatataactataataccatggacaagatgaaagtatttgaggcacacacagac
tacattagatgtgtggctgttcatcctacccttccttatgtactgtcttcgtctgatgat
atgctaataaagctttgggattgggataagggttgggtgtgtactcaaatttttgagggg
cattctcattatgtgatgcaagtaacgtttaatcccaaagacactaacacctttgcaagt
gcatcccttgatcgcacaataaagatttggaatcttggatcccctgatcccaactttaca
ttagatgcccatcagaaaggagtgaattgtgtcgattacttcacaggtggtgacaaacct
tacctcattactggttctgacgatcacactgctaaggtatgggactaccaaaccaagagc
tgtgtccagacacttgatggtcacacacacaatgtctctgcagtctgttttcatccggac
cttccaattataattacaggttctgaagatggaacggttcgcatatggcattccacaact
tataggcttgaaaatacattaaattatggccttgaacgagtttgggcaattgggtacatg
aagagctcacgccgggttgtgattggttatgatgaaggaaccattatgataaaacttggc
cgggaagaacctattgctagtatggacaacagtggaaagatagtatgggctaagcataac
gagattcaaacagtaaacatcaagagtgtgggagcagactttgaggttactgatggagag
agattgccattagctgttaaggagatgggaacttgtgatctttacccacagagcttgaag
cacaatcccaatgggaggtttgttgttgtctgtggagatggtgagtatattatatatact
gctcttgcatggagaaacaggtcatttggttcagctttggagtttgtttggtctgcggat
ggagaatatgctgtgagagaaagtacatcaaagatcaaaattttcagtaaaaattttcag
gaaaagaagagtatcaggcccaccttttcagccgagcacatctatggaggaactctatta
gccatgtgttccaatgactttatttgcttctatgattgggcagagtgcagattgattcga
cgaattgatgtaaatgtgaaaaacgtgtattgggctgatagtggtgatttggtggcaata
gccagtgatacgtcattttatatcctgaagtacaatcgtgatgctgtgtcttcctgctta
gatagtggaaggcctgtggatgaacaaggggttgaagatgcattcgagctcctgcatgaa
gttaacgaacgtgtgaggactggcctttgggttggggattgcttcatttacaataactct
tcttggagattaaactactgtgttggtggtgaggtaaccacaatgtttcatttggatcga
cccatgtatttgcttggatatcttgccagccaaagtcgggtctatttgatagacaaagag
ttcaatgttgttggatacacattgcttcttagcttgattgagtacaagacccttgtaatg
cgcggggactatgaaagagccaatgaagtcttaccttcaattcctaaggagcaccgtaac
agtgtggctcgtttcttggaatcacgaggtatgatagaggaagctctggaagtagctact
gatctggattatagatttgatcttgcgatacagcttggtagattagagattgcaaaggaa
attgcggtagaagtacaaagtgagtccaagtggaagcagcttggtgaattggctatgtcc
atcggaaagttagacatggccgaggaatgcttgaagtatgctgtggattttagtggcttg
ttattgctgtattcttccctaggagatgctcaagggataacacaacttgcaacccttgcc
aaggagcaaggaaagaacaacgttgctttcctttgtttatttatgttgggtagattggaa
gactgtcttcagttgttggtagaaagtaatcggattcctgaagctgctttgatggctcga
tcttatcttccaagcaaagtatcagagatagtcgcaatttggaggaaggacctgaataag
gttaacccaaaggctgccgagtcattggctgatcctgaggagtatcccaatttgtttgat
gattggcaagttgcactatctgttgaatctagagctacacaggacaggggagtttttact
tcggcagaggagtatgctactcttgctgataagccatacaatacactcgtggaggcattt
aggagcatgcaaattgaaggacatcttgaaaatggagacatcgatcatgaggatactgaa
cagaatggagatgagcaagacgagcacattgcagaacacagtggagatgagcaagacaag
cacgttgcagaacacagtggagatgggcaagacaagcacattgcagaacacaatggagat
gagagccaagaggagggtgagggtattgtggttgatgctgattctaccgatggtgcagtt
ctcgttaatggtagtgagggtgatgaagagtggggtacaaataccccgtcagcctaa
DBGET
integrated database retrieval system
