Cucurbita moschata (crookneck pumpkin): 111452247
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Entry
111452247 CDS
T05248
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013
Nucleocytoplasmic transport
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111452247
03015 mRNA surveillance pathway
111452247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111452247
03041 Spliceosome [BR:
cmos03041
]
111452247
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111452247
Spliceosome [BR:
cmos03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
111452247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
111452247
NCBI-ProteinID:
XP_022948624
UniProt:
A0A6J1GAF7
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFPVELEQLVDMTKVKMDVIKPWIATRVTELL
GFEDEVLINFIYGLLDVKEVNGKEVQIQLTGFMEKNTVKFMKELWTLLLSAQKNASGVPQ
QFLDAKEEEIRKKKAESDFLANEIQKKREKENREIEEQRLKKMDDGAEKVAALEPTSKNV
RSRAMRNHSEEEEGAEKRNGFRGRSSDRHKSRSISRSPQRRRSSFSRARLSASPHRRDRR
DSFSPRRRTPYSRRSRSTSLRKSRSPSQHSSPSPPRKSPYRSPPPVQRRSSSPTRRRSPS
VDKHKRSPSPVGQRRSLSPIRRRRSPSGIRRRRSPSPKWRRRSPSPEWRRRSPSPGRRRR
SPSPGRRRRSPSPIRRRRSPSPIRRRRSPSPIRRRRSPSPPRHHRSPSPHRRKSPSFARR
RRSPSPPHRRRSPSPVRYGRSRSPVRRHKSRSPVRRRLSTSSSPVRKLDRSSPLDHHRTP
SPLEHRSPSTPLSKSPPSPLRSSPARLKRSSPSRRRSISPYDRSSLEEKGNLSPVKRKSA
HQRRSLSQSPGRNVQTSPASQQPSRSLRSPERNSREGNNSNTRTLASPSSLEKSPALTDS
PPVTRSASDDRRLSSPRSRAKQYRHDSHSTRTREDEVAYARESGNRKSLNSSIVGKTKNS
PVDAKVLSPGSSKHSRKETPASPDVQKSSSSHKEGMKQDEKSHSLPSKTKETEHLTVEKV
DHNNRDEASDSDLEEGYKRKTGSREKKRHRRSDRHDTSSDSEESYDTELERKEARRRKKE
ERRLRKEKKRQKREERRRKKEGRRAEKTKAKDLSDDDSDDDQVGKDESYKRNGADEAEHK
RLEIELRKKALESFNARKGRGPE
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggctttttccggggtacgtctgcggaccaagacactcgtttttcgaacaag
caagcaaagctgctgaagacacagaagttcccggttgaactagaacagttggtggatatg
acaaaggtgaagatggatgttatcaagccgtggattgctacgagggtgactgagctcctt
gggtttgaagatgaagttcttattaacttcatatacggccttttggatgtcaaggaagta
aatgggaaggaagttcaaatacaactcactgggttcatggaaaagaatactgtgaaattt
atgaaagagctttggacactactccttagtgcccagaaaaatgccagtggtgtccctcaa
caatttttggatgccaaagaagaagaaattagaaagaagaaggcagagtcagattttctt
gcaaatgaaattcagaaaaagagagagaaggaaaatcgagaaattgaggagcagagattg
aagaagatggatgatggggctgaaaaggtggccgctttggagcctacctcaaagaatgtg
cgctcaagggctatgagaaatcattcagaggaagaggaaggggctgaaaagagaaatggt
tttaggggaagaagcagtgatagacacaagtcaagaagcatatctcgatcacctcaacga
cgacggagctctttttcacgagcaagattgtctgcaagtccacatcgaagggatcgtcgt
gattcattctctccccgacgtagaacaccatattcaaggagatctagatctacttcactt
cgtaaatctcgttctccttctcaacatagctcaccatctcctcctcgtaaatcaccatat
cgatcaccaccacctgtacaacgtcgatcatcatcacctacccgtcgaaggtcaccatca
gttgataagcataagagatcaccatcacccgtaggccaacgtaggtcactatcacctata
agacgtcgtcgttcaccttcaggtattcgacgtcgtagatcaccatcacctaaatggcgt
cgtagatcaccatcaccagagtggcgtcgtaggtctccgtcacctggacgacgtcgtaga
tcaccatcaccagggcgacgtcgtaggtcaccatctcctatacggcgtcgcaggtcgcca
tctcctatacggcgtcgaaggtcaccatctccaatacgacgtcgaaggtcaccatcccca
ccacggcatcatagatcaccatctccacaccgccgcaagtcaccttcttttgcacgtcgt
cgtagatcaccatctccaccacatcgtcgaagatcaccatccccggtacgctatggcaga
tcacgctcacctgttagacgccacaagtctcgctctccagtacgacggcgtttgtcaact
tcctcctcaccagtaaggaaattggataggtcatcaccacttgatcatcacagaacaccc
tcacctctggaacatagatctccatcaaccccattgagcaaatcacctccatcaccacta
aggtcatctccagcacgcctcaagagatcaagtccatctcgacgtagatccatttcacca
tatgatcggagttcattggaggagaagggaaacctttcgcctgtcaaaagaaaatctgca
catcagaggaggtctctctctcaatctcccggcagaaatgttcagacatccccagcatcc
caacaaccttctaggtcattgaggtctccagaaaggaattctagggaagggaacaattcc
aataccagaacattggcttcaccatcgtctttggagaagtctccagccctaacagattct
ccaccagttacgaggagtgctagcgatgataggaggttaagttcaccacgatcacgggca
aagcagtatcgtcatgacagccattcaacaaggacaagggaagacgaggtcgcctacgct
agggagagtgggaatagaaagtccctgaattcttccattgtcggtaagacgaaaaattct
cctgtggatgccaaagtcctctcacctggaagtagtaagcattctcgaaaggagacgcct
gcaagccccgatgtacaaaaatcttcgtcatcacacaaagaaggtatgaaacaggatgaa
aagagccattcgctcccaagtaagaccaaggaaactgagcatttgacagttgaaaaagtt
gatcataataaccgggacgaggcttcagattctgatttggaggaaggctataagcgtaaa
actggaagtagggagaagaaaagacacagaagatcagacagacacgacacttcttcggac
tctgaagagagctatgatactgaattggagaggaaggaagccaggaggaggaagaaggag
gagaggaggttgcggaaggagaagaagcgccaaaaacgcgaagagcgtaggcggaaaaag
gaagggcggcgtgcagagaagacaaaagctaaggaccttagtgatgatgactcagatgat
gatcaagttggaaaggacgagtcttataagcgtaatggcgcagatgaggccgagcacaaa
agactagagatcgagttaaggaagaaggcactggaatcattcaacgcgaggaaaggaaga
ggccctgaatag
DBGET
integrated database retrieval system
