KEGG   Cucurbita moschata (crookneck pumpkin): 111452322
Entry
111452322         CDS       T05248                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like
  KO
K10839  UV excision repair protein RAD23
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03420  Nucleotide excision repair
cmos04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    111452322
  09124 Replication and repair
   03420 Nucleotide excision repair
    111452322
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cmos03051]
    111452322
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111452322
Proteasome [BR:cmos03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    111452322
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      111452322
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE UBA_3 TECR_N Dsc3_N MCM_N Rad60-SLD_2 UBA_RAD5A
Other DBs
NCBI-GeneID: 111452322
NCBI-ProteinID: XP_022948743
UniProt: A0A6J1GA66
LinkDB
Position
Unknown
AA seq 387 aa
MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP
APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDESLPAPASGAPNTAPL
NMFPQALPAGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
IEAFLACDRNEELAANYLLENSGDFDD
NT seq 1164 nt   +upstreamnt  +downstreamnt
atgaagctcactgtgaagaccctcaagggaagccacttcgaaattagggttcagcccacc
gacaccgtgatggctgtcaagaaacatattgaagatatacaaggaaaggctaattatcct
tgtggtcagcaattattgatacacaatggtaaagttctaaaagatgaaactacgctggca
gaaaacaaagtatctgaagagggtttcctagttgtcatgctaagcaagagcaaaacgtct
ggctcagcagggcagtcatcgactcagactgctcaaaacccacctgtagctcaaccaatt
ataaattcaactcctcctacccaagttgcaccatctccgactcctgcacctcaagctccc
gcaccagccccgccttctgcccctaagaacactacgtctacttcagaccgggcgacagat
aatgtgcaaacagatacgtacggtcaagctgcttcaaatttggtcgctggtaataacctg
gaagagaccattcaacaaataatggatatgggaggtggcaactgggacagagaaacagtt
gttcgtgcactaagagctgcatacaacaatccagagcgtgcagtggattacttgtactcc
ggtatcccggaatctgcagaagttgcagtaccagtgggtcgttttggttctggtcaagcc
actggaactgatgaatcccttcctgcacctgcctctggagcacccaacacagcccccttg
aacatgtttcctcaggcacttcctgctggtggcggcggcggtggcggcggtaatcttgga
tctcttgaattccttagaaacaatccacagtttcaagccttgcggacgatggtgcataca
aacccccaaatcttacagcccatgcttcaagaacttggcaagcagaatccccagcttttg
agactcattcaggatcatcatgcagagttccttcagttaatcaacgaacctgtcgataat
tttgagggagagatgtttgaacaggctgacccggacatgcctcatgccattaatgttact
ccagccgaacaggcagccatcgaacgactcgaggcgatgggattcgatagagccttagtc
atcgaggcatttttggcgtgcgatcgcaacgaggaactagcagctaactacttactggag
aattctggagattttgatgactaa

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