Cucurbita moschata (crookneck pumpkin): 111452322
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Entry
111452322 CDS
T05248
Name
(RefSeq) ubiquitin receptor RAD23b-like
KO
K10839
UV excision repair protein RAD23
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03420
Nucleotide excision repair
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111452322
09124 Replication and repair
03420 Nucleotide excision repair
111452322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cmos03051
]
111452322
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111452322
Proteasome [BR:
cmos03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111452322
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111452322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
CUE
UBA_3
TECR_N
Dsc3_N
MCM_N
Rad60-SLD_2
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
111452322
NCBI-ProteinID:
XP_022948743
UniProt:
A0A6J1GA66
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MKLTVKTLKGSHFEIRVQPTDTVMAVKKHIEDIQGKANYPCGQQLLIHNGKVLKDETTLA
ENKVSEEGFLVVMLSKSKTSGSAGQSSTQTAQNPPVAQPIINSTPPTQVAPSPTPAPQAP
APAPPSAPKNTTSTSDRATDNVQTDTYGQAASNLVAGNNLEETIQQIMDMGGGNWDRETV
VRALRAAYNNPERAVDYLYSGIPESAEVAVPVGRFGSGQATGTDESLPAPASGAPNTAPL
NMFPQALPAGGGGGGGGNLGSLEFLRNNPQFQALRTMVHTNPQILQPMLQELGKQNPQLL
RLIQDHHAEFLQLINEPVDNFEGEMFEQADPDMPHAINVTPAEQAAIERLEAMGFDRALV
IEAFLACDRNEELAANYLLENSGDFDD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcactgtgaagaccctcaagggaagccacttcgaaattagggttcagcccacc
gacaccgtgatggctgtcaagaaacatattgaagatatacaaggaaaggctaattatcct
tgtggtcagcaattattgatacacaatggtaaagttctaaaagatgaaactacgctggca
gaaaacaaagtatctgaagagggtttcctagttgtcatgctaagcaagagcaaaacgtct
ggctcagcagggcagtcatcgactcagactgctcaaaacccacctgtagctcaaccaatt
ataaattcaactcctcctacccaagttgcaccatctccgactcctgcacctcaagctccc
gcaccagccccgccttctgcccctaagaacactacgtctacttcagaccgggcgacagat
aatgtgcaaacagatacgtacggtcaagctgcttcaaatttggtcgctggtaataacctg
gaagagaccattcaacaaataatggatatgggaggtggcaactgggacagagaaacagtt
gttcgtgcactaagagctgcatacaacaatccagagcgtgcagtggattacttgtactcc
ggtatcccggaatctgcagaagttgcagtaccagtgggtcgttttggttctggtcaagcc
actggaactgatgaatcccttcctgcacctgcctctggagcacccaacacagcccccttg
aacatgtttcctcaggcacttcctgctggtggcggcggcggtggcggcggtaatcttgga
tctcttgaattccttagaaacaatccacagtttcaagccttgcggacgatggtgcataca
aacccccaaatcttacagcccatgcttcaagaacttggcaagcagaatccccagcttttg
agactcattcaggatcatcatgcagagttccttcagttaatcaacgaacctgtcgataat
tttgagggagagatgtttgaacaggctgacccggacatgcctcatgccattaatgttact
ccagccgaacaggcagccatcgaacgactcgaggcgatgggattcgatagagccttagtc
atcgaggcatttttggcgtgcgatcgcaacgaggaactagcagctaactacttactggag
aattctggagattttgatgactaa
DBGET
integrated database retrieval system