Cucurbita moschata (crookneck pumpkin): 111452602
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Entry
111452602 CDS
T05248
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111452602
Spliceosome [BR:
cmos03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111452602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_1
PPR_long
Motif
Other DBs
NCBI-GeneID:
111452602
NCBI-ProteinID:
XP_022949171
UniProt:
A0A6J1GB98
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MSIRTSAFATVTLLRSLTLPFSQCHHHFRCRNYVIRSLCIPTYSAKGRRQLPRIPAFASS
SSVEALVYDRDSPAESEEPLCSPYSTGAEGFASADLKHLGAPALEVKELDELPEQWRRSK
LAWLCKELPAQKPGTLIRLLNAQRKWMKQDDAAYLIVHCLRIRENETAFRVYKWMMQQHW
YRFDYALATKLADYMGKERKFSKCREVFDDIINQGCVPSESTFHILIVAYLSAPIQGCIE
ESSTIYNRMIQLGGYQPRLSLHNSLFKALVSKPGDLSKHHLKQAEFIYHNLATTGLELHK
DIYGGLIWLHSYQDTVDKERIMSLRKEMHQAGIEEEREVLVSILRASSKLGDVMEAERSW
LKLKSFDGSMPSQAFVYKMEVYAKVGNPMKAFEIFREMEQLNSISAAAYQTIIGILCKFE
EVTLAESVMEGFIKSNLKPLKPAYVDLMNMFFNLSLHDKLELTFSQCLEKCKPNRTIYSI
YLNSLVKVGNLDRAEEIFSQMQTNGEIGVSARSCNIILSGYLLSGDYLKAEKIYDLMCQK
KYDIDPPLMEKLDYVLSLSRKEIKKPVSLKLSKEQREILVGLLLGGLEIESDEGRKNHRI
QFEFHEDCSTHSRLRRHIHEQYHEWLHPASKLSDSDTDIPYKFCTVSHSYFGFYADQFWP
RGHPVIPNLIHRWLSPRVLAYWYMYGGCRISSGDFVLKLKGSREGVAKIVKSLREKSMSC
KVKRKGRVYWIGLLGSNATWFWKLIEPFILDDLKDSLQADSLNMEKAANETYNINFDSQS
DSDEEASS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcgaacctctgccttcgccaccgtcacccttctccgctctctcactcttccc
ttctctcaatgccaccaccacttccgttgccggaactacgtcatccgttctctctgtatc
ccaacatattcagcgaaaggacgacgacaacttccgagaattcctgcctttgcttccagt
tcttccgttgaagcgttggtgtatgaccgggattccccggccgaatctgaagagcctttg
tgttctccatacagtactggcgctgaggggtttgcgtcggcggatttgaaacacttggga
gcgcctgcgcttgaagtcaaggagctggatgagttgccggagcaatggcgtagatccaaa
ttggcttggctttgtaaagaattgccagcacagaagccgggaacattgatacggctgctt
aatgctcagaggaaatggatgaagcaggatgacgcggcctatctcatcgtgcattgtttg
cgtattcgcgaaaatgagactgcttttagggtgtacaagtggatgatgcaacaacattgg
taccgatttgattatgctttagctactaagcttgctgattacatgggcaaggaacggaag
ttctcgaagtgtcgggaagtatttgatgatataattaatcagggatgtgtgccaagtgaa
tccacatttcatatattgattgttgcctaccttagtgcacctatccaaggatgcatagag
gaatcaagtaccatttacaatcgtatgattcagttaggaggttaccaaccacgtcttagc
ttgcacaattctctctttaaagctctggtgagcaaaccaggggatttgtcaaagcatcat
cttaaacaggctgagttcatatatcacaatctggcaacaactggacttgagttgcataag
gatatatatggtggtctaatttggctacatagttatcaggatactgtagacaaagaaagg
ataatgtcactaaggaaagaaatgcatcaagcaggaattgaggaagaaagagaagtcctt
gtatccatcttgagagcgagctcgaaattgggggatgtgatggaagcagagagatcgtgg
cttaaacttaagtcttttgatggtagcatgccatcccaggcttttgtttacaaaatggaa
gtatatgcaaaggtgggtaatccgatgaaagctttcgagatatttagggagatggagcag
ttgaactctataagtgctgcagcatatcagacaattattgggattttatgtaaatttgaa
gaggtaacactagcagaatccgtcatggaaggcttcataaagagtaatttaaagcccctc
aagccagcttatgttgatttgatgaatatgtttttcaatttaagcttacatgataagtta
gagttaaccttctcccagtgccttgagaagtgtaaaccaaatcgtactatttacagcata
tatttgaactctttggtaaaagttggtaatctcgacagggctgaagaaatatttagtcag
atgcaaacaaatggagaaattggtgtaagtgctcgttcatgcaacattattttaagtggg
tacctgttaagtggggattatttgaaggctgaaaaaatatatgacttgatgtgtcagaaa
aagtacgacattgatcctccattaatggagaaacttgattatgtcctaagcttgagtagg
aaggagattaagaagccagtaagcttgaagttgagtaaagaacaaagggagattttagta
gggttgttattaggtggcctggagatcgaatctgatgaagggaggaagaatcataggatc
caatttgaattccacgaagattgtagcacccactctcgtttgaggagacacatacatgag
caatatcatgagtggttacatcctgcttcaaagttaagcgatagtgatacagatatacca
tataaattctgcaccgtttcacattcatattttggtttctacgccgatcagttttggcca
cgaggccatcctgtaatccctaatctaattcaccggtggctttcacctcgtgttcttgca
tactggtatatgtatggaggctgcaggatatcgtcaggagatttcgtactgaagctaaag
ggaagtcgtgagggtgttgcgaagattgttaaatctctgagagaaaagtccatgtcttgc
aaggtcaaaaggaagggcagggtgtattggataggcttacttggaagcaacgccacatgg
ttctggaaactaattgaacctttcattctggatgacttgaaagatagtttacaggcagac
agcctcaacatggagaaggctgcaaatgaaacttacaatatcaactttgatagtcaatct
gattccgatgaggaggcgtccagttag
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