Cucurbita moschata (crookneck pumpkin): 111452802 Help Entry 111452802         CDS       T05248                                  Name (RefSeq) transcription factor bHLH140   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism cmos  Cucurbita moschata (crookneck pumpkin) Pathway cmos03410   Base excision repair Brite KEGG Orthology (KO) [BR:cmos00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     111452802  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cmos03400]     111452802 Enzymes [BR:cmos01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      111452802     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      111452802     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      111452802 DNA repair and recombination proteins [BR:cmos03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      111452802   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      111452802 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DcpS_C AAA_33 Macro zf-C2HE HIT AAA_18 Zeta_toxin CPT AAA nSTAND3 AAA_22 ABC_tran AAA_17 AAA_16 DUF2957 AAA_29 Motif Other DBs NCBI-GeneID:  111452802 NCBI-ProteinID:  XP_022949470 UniProt:  A0A6J1GCV0 LinkDB All DBs Position Unknown AA seq 742 aa AA seqDB search MDMDIDENSTAKGNERRTKLIMVILVGAPGSGKSTFCELVMASSSRPWVRICQDTIGNGK SGTKAQCLKSAASALNDGKSVFVDRCNLEIEQRSEFVKLGSSLVDVHAVVLDLPAQLCIS RSVKRTGHEGNLSGGKAAAVVNKMLQKKELPNLNEGFKRITFCHSETDVQSAIDTYKSLG LHDALPDGCFGQKNADKKVQLGIMRFLKKAENPAKTCSNANTNKDFPSSQTTQEKKESSC TMLSNVNKESEKGENPGVGSLENNISGSDPPTLAFPSISTSDFKFSHEKAAEIIVEMVEE FMDKLGNARLVMVDLSHGSKILSLVKAKAAKKNICSTKFFTFVGDITKLKSDGGLHCNVI ANAANWRLKPGGGGVNAAIFSAAGPSLEEATKQQAKSLRPGNVVAVQLPSTSPLFNREGV THVIHVLGPNMNPQRPNYLNNDYDEGCKLLRDAYSSLFQAFISIVKDEFKSAKGIDERLG SAPSESRKHSEDTHHKFKRAELQIPERSKKWKGTQESAEALNQNNNKISHKMSKHWGSWA QALYNTAMYPERHANIVLETSDDVVVLNDIYPKARKHLLIVARYEGLDQLADVHKEHLPL LKTMHAVGMKWIDKFIHDDASLVFRLGYHSAPSMRQLHLHVISQDFDSSHLKNKKHWNSF NTDFFRDSVDVIDEVSSHGKAIIKDDESLMSMEFRCNRCRSAHPNLPKLKTHISKCQSPF PSTLLEGGRLVNASGNSRNFLS NT seq 2229 nt NT seq  +upstreamnt  +downstreamnt atggatatggatatcgacgaaaattcgacagccaaaggaaatgaacggcgaacgaagctc ataatggtgatattagtgggcgcacctggaagcggaaagtccaccttctgcgaactcgta atggcttcctcttctcgcccttgggttcgaatctgccaggataccattggaaatggcaag tccggaaccaaagcacagtgtctgaagagtgcagccagtgcattgaatgatggaaagagt gtatttgtggacagatgcaatcttgaaatagagcagcgttctgagtttgtgaaactaggt agctctctagtggatgtacatgctgttgtattggatcttcctgcacagctctgtatctcc cgttcggttaagcggaccggtcatgaagggaacctatcaggtggaaaagctgctgctgtt gtgaataaaatgctgcaaaagaaagaattgccgaacctgaatgaagggttcaagcgtata acattttgtcacagtgaaacggacgttcaatccgccatagatacgtataaatcacttggt ttacatgatgcacttccagatggatgttttggacagaagaatgcagacaagaaagtacaa ttaggcataatgaggttcttaaagaaagcagaaaatcctgctaaaacatgttctaatgcc aataccaataaggattttccaagttctcaaactacccaggaaaagaaagagtcttcctgc acgatgttgagcaatgtcaataaagagtcggagaaaggcgaaaatccaggcgttggatcc ttagaaaacaatatttctggaagtgatcctccaactcttgcatttccttctatttcaaca tcggatttcaagttcagccatgaaaaggctgctgaaattattgttgagatggtggaggaa ttcatggataagcttgggaatgccagacttgttatggtagacttaagtcatggatcaaag attttgtctttggttaaagctaaagcggccaagaaaaatatttgttccaccaagtttttt acatttgtaggtgatataactaaactcaagtcagatggtggattgcactgcaatgtaata gccaatgctgcaaactggcgattgaaaccaggagggggtggtgtcaatgctgcaattttt agtgctgcaggtcccagtctggaagaggcaacaaaacaacaagccaagtcccttcgacct ggcaatgttgtggccgttcaattgccttcaacttctcctttgtttaatagggaaggagta acccatgtcatacatgttcttggaccaaacatgaatcctcaaagaccaaattatctcaac aatgattatgatgaaggttgcaagcttcttcgtgatgcttattcttctctatttcaagcc tttatttcaatagtaaaagatgagtttaagtcggcgaagggaattgacgaacgcctcggc tcagcaccttcagaatcacgaaaacactctgaggacacccatcacaagtttaagagagcg gagttgcaaattcctgaaagaagcaaaaagtggaaaggaactcaggaatcagctgaagca ttaaaccaaaacaacaataagatttcccacaagatgagtaagcactggggctcatgggca caagcactttacaacactgcaatgtatcccgagagacatgccaatattgtactggagaca tcagatgatgttgtagtactgaatgatatttatccaaaagcacgcaagcatcttctgata gtggctcgatatgaaggcctcgatcaactagctgatgtacataaagaacaccttccactg ttgaaaacgatgcacgccgtgggtatgaagtggattgataagttcattcatgacgatgca tcgttggtttttcgcctcggataccactcggctccatccatgaggcaactgcacctacat gttataagccaagattttgactccagtcatctgaagaacaagaagcattggaattctttc aacaccgatttcttccgagactcggtcgacgttatagacgaagtcagtagccatggaaag gcaatcatcaaggacgacgagagcttgatgtctatggagtttcgttgcaacagatgcaga agtgcccatcccaacttacccaagctgaaaacacatatttccaaatgccaatcgcctttc ccttccacgctactcgagggcggtcgtttagtgaatgcttcaggtaattctcgtaacttt ctttcgtag

DBGET integrated database retrieval system