Cucurbita moschata (crookneck pumpkin): 111452818
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Entry
111452818 CDS
T05248
Name
(RefSeq) LOW QUALITY PROTEIN: U-box domain-containing protein 13-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111452818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111452818
Enzymes [BR:
cmos01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111452818
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
U-box type E3
111452818
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PUB10_N
Arm
ARM_PUB
U-box
ARM_ARMC5
HEAT_2
HEAT_EZ
MLKL_N
Neurochondrin
Arm_2
zf-RING_UBOX
PUB2_N
zf-C3HC4_4
KAP
zf-Nse
DUF8323
MCAfunc
SfmD_perox
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
111452818
NCBI-ProteinID:
XP_022949488
UniProt:
A0A6J1GC82
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MEEDNGALIQSLIDVVNEIAWISDFRLTVKKQYCNLSRRLKLLIPMFEEIRDTKEPVSED
TLKALVSLKEALESAKKLLRFGSQGSKIFLAVEREQIMVKFHEVTAQLEQALEGIPYDKL
DVSDEVKEQVELVLAQFRRAKGRADTPDSELMDDILALYNTSNDSSVDQNRLRRLAEKLQ
LIGISDLTQESIALHEMVTASGGDPGDPVESIGTMSGLLKKIKDFVQTENLETDTPGRDK
SPPASCSGQISNEKNNAAPVIPEDFRCPISLELMRDPVIVSTGQTYERSCIEKWFEAGHG
TCPKTQQNLSSTTLTPNYVLRSLIAQWCEANGIEPPKRPSSDQSCRSSSSCSAAERTKID
ILLCKLASGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRVQEHAV
TALLNLSICEDNKGSIISSGAVPGIVLVLKKGSMEARENAAATLFSLSVVDENKVRIGAS
GAIPPLVTLLSQGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMQLLTEPGSGMVD
EALAILAILSSHPEGKAVIRSAKAVPVLVDVIGTGSPRNRENAAAVLVHLCSGDEQHLLE
ARELGVMSSLIDLAQNGTDRGKRKAAQLLERMNRLLEHTEETRVQAPESQPQNQPSLSST
TTEVAGS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagataacggcgctctgattcagagcttgatcgatgttgtgaacgagattgcg
tggatctcggattttaggcttactgttaagaagcagtattgcaatttgtccaggagattg
aagcttttgatcccaatgtttgaagagattagggataccaaagagccagtgtctgaggat
actctcaaggctctcgtgtcgttgaaagaagccctcgaatcggctaagaagttgctcaga
tttggaagccaggggagcaagatttttctggccgttgagagggagcaaattatggtcaaa
tttcatgaggtaacggctcagttggaacaagctttggaaggaataccctacgataaactt
gatgtatccgatgaagttaaggagcaggtcgagcttgttcttgctcagttcagaagagcc
aaaggcagggccgatacccctgactctgagctgatggacgatatccttgccctttacaac
acaagcaatgattcttctgtggatcagaatcgcctcaggagattagctgaaaaattacaa
ttaattggaatatccgaccttacacaagagtccatagctttgcatgagatggttactgct
agtggaggtgatccaggtgatccagttgagagcattgggacgatgtcagggctgctgaag
aaaataaaagattttgtacaaacggagaaccttgaaacggatactcctggcagagacaag
agtcctcctgctagttgtagtggacaaatttcaaatgagaaaaataatgcggccccagtt
atacccgaagattttcgctgtcccatatccctggagttgatgagagatcctgttattgtc
tcaactggacagacctatgaacgttcctgcattgagaagtggtttgaagcagggcacgga
acatgtccaaagacacaacagaatctttcaagcactactcttacccccaattatgtgttg
cgtagccttatagcccagtggtgcgaggctaatggtattgaaccaccaaaacgacccagc
agtgatcaatcatgtagaagctcatcatcttgctcggctgctgaacgcacgaagattgat
attctgctctgcaaacttgcatcaggaaatcctgaagaccaacgatctgcagctggtgag
atccgacttcttgcgaagcggaatgcagataatcgtgttgcaattgctgaggctggtgca
atacctcttcttgttggccttctttcaactccagattctcgtgttcaagagcatgctgtg
acagcacttcttaacctttctatatgtgaggacaataagggaagcatcatttcctctggg
gcagttcctggtattgtgctcgtgctcaagaaagggagcatggaagcccgggagaatgct
gcagccactcttttcagcctttcggttgtggacgagaataaagttcgaattggtgcctct
ggagctatcccgccgcttgttacgctgcttagccaaggcactcaaagaggcaagaaagat
gccgcaactgctcttttcaacttgtgcatctaccaaggaaacaagggaaaggcagtgaga
gctggtgtagttccaaccttgatgcagcttctcaccgaacctggatccggaatggtggac
gaagccttagccatcttggcaatactctctagccatcccgaagggaaagcagtgatcaga
tctgcaaaggcagtgccagttttggtagatgttatagggacaggatcccccaggaacaga
gagaatgcagctgcagttctcgtgcatctctgctctggagatgaacaacacctattagag
gccagggagcttggagtgatgagttcattgatagatttggcacaaaatggcacggataga
ggcaagcgaaaagctgcacagttgcttgaacgaatgaaccgactcttagagcacacggag
gagactcgggtgcaagcaccagagtctcaacctcaaaaccagccatccctatcgagcact
acgacggaagtcgctggtagctga
DBGET
integrated database retrieval system
