Cucurbita moschata (crookneck pumpkin): 111452858
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Entry
111452858 CDS
T05248
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111452858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111452858
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
111452858
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
111452858
DNA repair and recombination proteins [BR:
cmos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111452858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Ribosomal_S13
DUF7547
Motif
Other DBs
NCBI-GeneID:
111452858
NCBI-ProteinID:
XP_022949541
UniProt:
A0A6J1GCA1
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MPELPEVEAARRAIEEHCVGKVIKKAVIADDSKVIDGISPSDFEASLLGKTILSAHRKGK
HMWVRLDSPPFPTFHFGMAGAIYIKGVAVTNYKRSVVNEDDEWPSKYSKFFVELDDGVDL
SFTDKRRFAKVCLLKDPASVPPISKLGPDALLEPMALDDFVESLGKKKLAIKTLLLDQSY
ISGIGNWVADEVLYQARIHPNQSAATLSKESCAALHKSIQEVIEKALEVGADSSRFPNNW
IFHSREKKPGKAFVDGKEIHFITTGGRTSAFVPELQKLTGAEPKNQNSKRKINEGKKMND
EGVGEPVSKTKKTADTTDTKTKSKPKGPSKKPSTKRKSKINEDDGSDEEAENDDASDDED
NSHDIGKTKAGKRTNVGRMHDASESEKPSKPSKQTVPSSRSGRQRKKAK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttacctgaggtggaggcggcgaggagggccattgaagagcattgtgtcggg
aaagtcatcaagaaggccgtgatagctgacgattcgaaggtcatcgacggcatatcgcct
tctgacttcgaggcttcgctcttaggcaaaaccatcctctccgcccatcgcaagggcaaa
cacatgtgggtccgcctcgattctcctcctttccctacatttcacttcgggatggcgggt
gccatatacatcaagggcgtagctgtcacgaactataaaaggtctgtggttaatgaagat
gatgagtggccttccaagtactcgaagttctttgttgagcttgacgatggtgtagaccta
tccttcacagacaaaaggcggtttgcaaaagtctgcctgctgaaagacccagcttcagtg
cccccaatatctaagcttggcccagatgctcttttagagcctatggcactggatgacttt
gttgaatccttgggcaagaagaaactggctattaagactctattgcttgatcagagctat
atttcgggtattggcaattgggttgcagatgaagtactatatcaagcgagaattcatcca
aatcaaagtgctgctaccctatccaaagaaagttgtgcagctttgcacaagagcatacaa
gaggtaattgaaaaagcgcttgaagttggagcagatagtagtcggtttcctaataattgg
attttccattcacgcgaaaagaagcctggcaaggcttttgttgatggtaaggaaatccat
ttcatcactacaggcggcaggacatcggccttcgtacctgagttgcaaaagcttactgga
gctgaaccaaaaaatcaaaattcaaagagaaaaatcaacgaaggcaaaaaaatgaatgat
gagggtgttggtgaaccagtgagcaagacaaagaaaactgcagatacaacagatacaaag
acaaagtcaaagcctaagggtccctctaagaagccttcaaccaaaagaaaatccaaaatc
aatgaggacgatggctctgatgaagaagctgaaaacgatgatgccagtgatgatgaagac
aacagtcatgacattggaaagacgaaagcaggaaagaggacgaacgttgggcgaatgcac
gatgcttctgaatcggagaagccttcgaagccttcgaagcaaacagttcctagcagtcga
agtggtaggcagaggaagaaagcaaagtaa
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integrated database retrieval system
