Cucurbita moschata (crookneck pumpkin): 111452961
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Entry
111452961 CDS
T05248
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
111452961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111452961
03029 Mitochondrial biogenesis [BR:
cmos03029
]
111452961
Membrane trafficking [BR:
cmos04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111452961
Atg1 complex
111452961
Mitochondrial biogenesis [BR:
cmos03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111452961
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
111452961
NCBI-ProteinID:
XP_022949629
UniProt:
A0A6J1GDD7
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MASSHNTHSETAKVEQILTEFFPKTLQIILESRSPCISSRNFSGDQVLCSPSSSSSSSSS
MRPRDKWFNLALRECSATLENIDLWRPSYHEPMVIDVILVQREFGLDSVNASPRKDLVRN
LSLKDKHPFSLNSDKEEFGCQTKSEKVVERWMVHYESRKNRDTNSGCRRSSNSTAHTYKK
TILLLRSLYAFVRLLPAYKVFQDISSSGQIHPFTLVHRVSSFVEPFTRREEAEMQRFVFT
PVDTSCGRLCLSVLYRASLSDISSEPSTPMSPQVIPEYVGSPLTDPLKRFPTLPVSIAPS
HGSPSSLQFSRRHSWSYDHFRPSPPSVSFSPSPTYSESHALVSNPAFCRLPPSSLPPQPA
EMAMGHKDNVNYDEYYPSPVFSPSPSLSPPIGIPVRRLPNGLLQSESAPQSAPIAKLPHS
PALSSKPNLSPSSPLKASGPGIPLPAGSAIRKSFSLGRDESRRISGWRVSSNNSPISRSS
SRSFPDDLDDPEFPCPFDVDEDEMTDRGSRPESFDQKGNICEMLEPGGFFPIRKSQDAAV
GALVRMLQKAPPLRQDFTDPAADLVRPSTPDSPSRNPQQGTQISKSLGSKGRYAASSSIT
TSGLFVPKTTADALEELQSYREMKNLLLRQAGKTPI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcataatactcattccgagactgcaaaagttgagcaaattcttactgaa
ttcttccctaaaacgctacaaatcatacttgaatcgaggtccccttgtatttcatcgcgt
aatttcagtggtgatcaagttttgtgttctccatcttcctcctcctcctcctcttcgagt
atgaggccgagggataagtggttcaatttggcccttcgtgaatgctctgctacgttagag
aatattgacctctggcgtcctagctatcacgaacccatggtcatagatgttattttggtg
caaagggaatttggtttagactctgtgaatgcttctcctaggaaagatcttgttaggaac
ttgtctttgaaagacaaacatccattttctttgaattctgataaggaagagtttggatgt
caaaccaagagtgagaaggttgtagagagatggatggttcattatgaaagtaggaagaac
cgggatactaattctggctgcagaaggtctagtaatagcactgcacacacttacaagaaa
accattttactcttaagatctttatatgcctttgtgaggcttttacctgcttataaggtt
tttcaagatatcagttcatctggtcaaattcacccatttacacttgttcatcgtgtatcg
tcctttgttgagcctttcactcgaagagaagaggccgaaatgcagcgtttcgtgttcact
cctgtggacacttcttgtggtagactctgtctctctgtgttgtaccgtgcatccctttct
gatataagctctgaaccatcaactcctatgtcgcctcaagttattcctgaatatgttggg
agcccattgacagatccattgaaaaggtttccaacactccctgtatcgatagccccatcc
catggatctccatcgtcgttacaattctcgagacgtcatagttggagttatgaccacttt
agaccctccccaccttcggtctccttttcaccttcgccaacgtattcagaatctcatgct
ttagtttcgaatccagccttttgccgcttgcctccttcgagcttacctccacaaccagct
gaaatggctatgggacataaagataatgtgaattatgatgaatattatccttctcctgtc
ttttccccttcaccctcgttgtcgccaccaattggtattcctgtaaggcgattgccgaat
ggtctattgcagtctgaaagtgctcctcaaagtgcacctatagcaaagcttccccattcc
cctgcattatcaagcaaaccgaatttgtcgccatcctctccccttaaagcttctgggccg
ggtattccattgcccgctggctctgcaattagaaagtcattttctcttggaagagacgaa
agccgaagaatttcaggctggagggtatcgtcgaataactcaccaatttcaagaagctcc
agtagatcttttccagatgatcttgatgatccagagtttccctgcccctttgatgtggat
gaggatgagatgacggatagaggtagcagacctgaatcctttgaccaaaaaggaaacatc
tgtgagatgctggaacccgggggattcttcccaatccgtaaatctcaagacgctgccgtt
ggcgctctagtacgtatgcttcaaaaagctccaccacttcgccaggacttcaccgatcca
gccgcagatcttgtacgaccctcgacacccgattccccaagcagaaatccccaacaggga
actcagatatctaaatcattgggttcaaagggccgctatgctgcctcctctagtatcaca
acctctggtctttttgtgcctaaaactacagctgatgcattggaagaactacagagctac
agagagatgaaaaatttgttgctcaggcaagctggaaagactcccatatga
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