Cucurbita moschata (crookneck pumpkin): 111453086
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Entry
111453086 CDS
T05248
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111453086
Spliceosome [BR:
cmos03041
]
Common components
Common spliceosomal components
General mRNP proteins
111453086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
111453086
NCBI-ProteinID:
XP_022949796
UniProt:
A0A6J1GD19
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Position
Unknown
AA seq
600 aa
AA seq
DB search
MDFDEYDYLEKAVEDQDDKETKKAKKSESERNEKSSRKREVDEEAGSGGRVDEELKVKRS
KSEHENGKEDRDHSGRARDRHRRDREEETDGVKERDRERNRTRDRGSSEKERDRDRDREE
RDRERHKEKEKEKERERDKDRRDKERDRERHKEKDRERDKDRRDKEREREKEKERERRER
EKREREREEERSRRSRSRSVREKEREVDVRENRRMKEKKDMVEPEADPERDQRTVFAYQM
PLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAIALSGQLLFG
QPVMVKPSEAEKNLVQSNTSGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPVE
LVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQENVA
KSNDLDDDEGGGLALNAQSRALLMQKLDRTGIATSIAGSLGAPVLNASAPNQRATSLPLN
GQAAVAAPVLPANFTPPVLQSVGSPSECLLLKNMFDPSTETAPDFDLEIKEDVEEECSKY
GHVKHIYVDKNSAGCVYLQYDTVEAAINAQRAMHLRWFAGRQISVLFMQPQVYEAKFIGA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgacgagtatgattacttggagaaagccgtggaggatcaggacgataaggag
acgaagaaggcaaagaagagcgagagtgagaggaacgagaaaagcagcaggaagagagag
gtagacgaggaagctggctctggtggtcgtgtggatgaggagctgaaggtcaagaggtcg
aaaagcgagcatgaaaatgggaaggaggatagggatcactcgggccgagcgagggatcgg
catcgaagagacagagaggaagaaacagatggggttaaagagagggatagagaaaggaac
cgtacgagagataggggtagcagtgagaaggaaagggatagagacagggatagagaggag
agagatagagagagacataaggagaaggagaaggagaaggagagggagagagacaaggat
agaagggataaggagagagatagagagaggcataaggagaaggacagagagagagacaag
gatagaagggacaaggagagggagagggagaaggagaaagaaagagaaaggagagaaagg
gagaagagggagcgggagagagaagaggagagatcgaggcgaagcaggagtcggtctgtt
cgggagaaagaacgtgaagttgatgtcagagaaaacaggagaatgaaggaaaagaaagac
atggtggagcctgaagcggatccagagagggatcaaagaactgtatttgcatatcagatg
cctttgaaggccacagagagagatgtttatgaattcttttcaaaagcgggaaaggtgaga
gatgtccggctgatcatggacaggaattctagacggtcaaaaggagttgggtatgttgaa
ttttatgatgcgatgtctgtgcccatggctattgctctctctggtcaactactttttggg
caacctgttatggttaaaccttcagaggctgaaaagaatcttgttcaatcaaatacgtct
ggggcctctggtgcaggtccatatggagcagtagacaggaaactatatgttggtaatcta
cattttaacatgactgagactcaccttcgagagatttttgaagcttttggtcccgtggag
cttgtgcaactacctctcgaccttgaatcgggtcactgcaagggttttggatttgttcaa
tttgctcatctagagcatgcgaaggcagctcaaagcttgaatgggaaattagaaattgca
ggccgaaccattaaggtttcatctgtaacagatcacattggagcacaagagaacgttgca
aaatcaaatgaccttgatgatgatgaagggggcggtctggcattgaatgctcaatcaaga
gctctgcttatgcagaagcttgaccgcactggcattgctaccagtattgcaggatctctt
ggagctccagtgttgaatgcgtcagccccaaatcagagagctaccagcttgccactaaat
ggtcaagctgcagttgctgcaccagtacttcctgcgaattttactccacctgttttacaa
tctgttggaagtcctagtgaatgcctactactgaaaaacatgtttgatccatcgacggag
acagcaccagactttgacttggaaatcaaagaagatgttgaagaggagtgttctaaatat
ggtcatgttaagcatatatatgtggataaaaatagcgcgggatgtgtgtatctgcaatat
gatacggtggaagctgctattaatgctcaacgtgcaatgcacttgagatggtttgcaggc
aggcagatatcagtattgttcatgcaaccgcaggtttatgaagccaagtttataggagct
tga
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