Cucurbita moschata (crookneck pumpkin): 111453177
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Entry
111453177 CDS
T05248
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111453177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111453177
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
111453177
DNA repair and recombination proteins [BR:
cmos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
111453177
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
ResT-TelK_cat
Motif
Other DBs
NCBI-GeneID:
111453177
NCBI-ProteinID:
XP_022949935
UniProt:
A0A6J1GE66
LinkDB
All DBs
Position
Unknown
AA seq
500 aa
AA seq
DB search
MNSLFQFGFRSFLNPSSLAVNQSRFRIATLIPLQTVAMALNRLSLNLSTHNTTTGGTRKD
TSLETNSSEIIVEENDSKVDIQSFKDDPSKIEAMTVHELRMTLRSVGILAKGRKHDLVIA
LQRFVENQTVGCVIDAVEDYRAQQTERDSNVSPSEGETEAAETKFLTPKKRQSAKSGCNP
SRTKKKVSSEVDSSIVKHEHGVELMQKEPWTVLAHKKPHKGWIAYNPRTMRPKPLSKDTK
SVKILSWNVNGLRALLKGFSAVELAEREDFDILCLQETKLQEKDVLEIKNSLMDGYHYTY
WTCSVSKLGYSGTAIISRIEPISVRYGVGISEHDSEGRLVMVEFESFYLLNVYVPNSGDG
LKRLSYRITQWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYNPAGNRKSAGFTDEER
QSFETSYLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNRGWRLDYFLVSGTIAEKVHES
YILPDVGGSDHCPIGLVLKL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaactcactattccaatttgggtttcggagtttccttaatccctccagccttgcagtg
aaccagagtaggttcagaattgcaacattgatacctttgcaaacagttgcaatggcattg
aatcgactctctctaaatctatccacacacaatacaaccaccggtgggacaagaaaagat
acaagtctggaaacaaattccagtgagattattgttgaggaaaacgacagtaaagtggac
attcaaagttttaaggatgacccgtcgaaaattgaagctatgacggtccacgaactgaga
atgacattaagaagtgtaggtattctagccaaagggcgtaagcatgatcttgtaattgcg
ctgcaacgttttgtggagaatcaaacagtcggctgtgttattgatgcggtcgaagattat
agagcacaacagacagagagagattcaaatgtatcaccttctgaaggtgaaactgaggcc
gctgaaacgaaattcttaacaccaaagaagaggcagtcagctaaatctggttgtaaccca
tctagaacaaagaaaaaagtatcgtcagaagttgattccagcatcgtaaagcatgagcat
ggagtagagttgatgcaaaaggagccgtggactgttcttgctcataagaaacctcataaa
ggttggatagcatacaaccctagaaccatgaggcctaaacctctttccaaggatacaaaa
tctgtgaaaattttatcttggaatgtcaatgggttaagagccttactcaagggattttca
gccgtggaattagctgaaagggaagactttgatatattgtgtttacaggaaaccaaattg
caggagaaggacgtattagaaattaaaaactctctcatggatggatatcattatacctat
tggacgtgcagtgtttctaaacttggttattctggaactgcaatcatatcccggatagag
ccaatttcagtcagatatggtgtaggcatatcagagcatgatagtgaagggcggcttgtg
atggtggaatttgaatcgttttatttactaaatgtttatgttcccaattctggagacgga
ttgaagagactgtcatacagaattacccaatgggacccatctctcagtaattatatgaag
gagttggaaaaattgaagccggtgattttgactggtgatctgaattgtgctcatcaagag
atagacatctataatcctgcgggaaaccgaaaaagtgccggtttcacagacgaagaaagg
caatcgttcgagacgagctatttggaaaaggggtttgtcgatacatttagacaaaaacac
cctgatgttgttgggtatacatattggggttatcgtcatggtggacgcaaaaccaacaga
ggatggcgactcgactattttcttgtatcgggaacaatagcagagaaggtgcatgagtct
tacatactccctgatgtggggggcagtgatcattgcccaattggcctggttctcaaattg
tag
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integrated database retrieval system
