Cucurbita moschata (crookneck pumpkin): 111453324
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Entry
111453324 CDS
T05248
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111453324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111453324
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
111453324
Prokaryotic type
Archaeal type
TFB
111453324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
DUF2387
Motif
Other DBs
NCBI-GeneID:
111453324
NCBI-ProteinID:
XP_022950148
UniProt:
A0A6J1GE41
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MKCPYCSAAQGRCATSSTGKSITECVSCGRVVEERQFQPHHLFHLRAQDNPLCLVTSDLP
SPPVHHQNDQVLDPFEPTGFITAFSTWSLEHNPLFFRSCFSFSGHLAELERTLESTSSAN
LPSSSTVVVDNLRAYMQIIDVASLLGLDYYISEHAFKLFRDCCSATCLRNRSVEALATAA
LVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTL
LQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLT
EVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTVIASGRSAAPKVDAFERTSSEKDK
QIDTKPNISTEISDMGHPSRVKEDNESKFVSRGMYNPVINKSSTFCQPHPPPKGTVGKKS
QSDIQGMDIVKEHPHSTSQQ
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcccctactgttcggcggcgcaggggcggtgcgccacatcgagcactggcaag
tccatcaccgagtgcgtttcatgcggccgcgttgttgaagagcgacaattccagcctcat
cacctcttccaccttcgcgctcaagataaccccctttgtctcgtcacctccgacctaccc
tcccctccggtccaccaccagaacgatcaggttttggatcctttcgagcccacaggcttc
attacagccttctccacatggtccttggagcacaatccactcttcttccgctcctgcttc
tccttctccggtcaccttgcggagctcgagcgcaccctagagtctacgtcgtcagccaat
ttaccgtcgtcgtcgacggtcgtggtcgataaccttagggcttatatgcagattatcgat
gtggcttctcttttggggttggattactatatttccgagcatgcgtttaagttgtttaga
gattgctgttcggctacttgtttaaggaaccggagcgttgaggcgcttgccactgctgca
cttgttcaggcaattagggaggcgcaggagccccgaacccttcaggaaatctccattgca
gccaatgtaccccaaaaagagatagggaagtacatcaagattttgggagaagctttgcaa
ttaagtcaacctatcaacagcaattccatttcagtccatatgccaaggttctgcacgctt
cttcaactcaataaatctgctcaggaactggctactcacatcggggaagttgtcatcaac
aaatgcttctgcactcgcaggaatcccattagcatctcggctgctgctatatatttagct
tgccaattagaagacaaacggaagacacaagcagaaatttgtaaggttacaggtcttact
gaagtcaccctccggaaagtctacaaagagctactagaaaattgggatgatttgcttccg
tctaattatactcctgctgtccctccagaaagggcatttcccacaactgtaattgcttca
ggccgttctgctgctccaaaagttgatgcatttgaacggacgtcttcagagaaagacaag
cagatagacactaaacctaatatatccaccgagatctcagacatgggtcatccatccaga
gtcaaagaagataatgagagtaaatttgtatcccgtggaatgtataaccctgtaattaac
aagtcatcaactttttgtcagccacatcctcctcctaaaggcactgttgggaagaagagt
caaagtgatatccagggaatggatattgttaaggagcacccgcactccaccagccagcaa
taa
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