Cucurbita moschata (crookneck pumpkin): 111453438 Help Entry 111453438         CDS       T05248                                  Name (RefSeq) protein RRP6-like 2   KO K12591   exosome complex exonuclease RRP6 [EC:3.1.13.-] Organism cmos  Cucurbita moschata (crookneck pumpkin) Pathway cmos03018   RNA degradation Brite KEGG Orthology (KO) [BR:cmos00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     111453438  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cmos03019]     111453438 Messenger RNA biogenesis [BR:cmos03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Exosome cofactors      111453438 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_pol_A_exo1 HRDC PMC2NT DUF4259 Motif Other DBs NCBI-GeneID:  111453438 NCBI-ProteinID:  XP_022950321 UniProt:  A0A6J1GEI0 LinkDB All DBs Position Unknown AA seq 934 aa AA seqDB search MDVDQSDSQKAQTLQSLTSGSLGSSLSKLAGSSQGIPAGKDFHFYYNFDEFKIPIRSIDR QSQSMLETIGSSAEVWGKEMAFPEDNDDAYDWLVNVNDEILERFDVSLDEFQRIRKEEEE ESGRAVALTADADDGFQLVCGKKKKSPSHGDEVHDSFESSVKVATKDRRTLGVKPKVPFH IPTIRRPQDEFNILVNNANQPFEHVWLQRSEDGSRFVHPLEKLSVLDFVDKINEDFQPVY PPSLDCTPFKFIEEVNDLKELAAKLRRENEFAVDLEHNQYRSFQGLTCLMQISTRTEDFV VDTLKLRIHVGPYLREVFKDPSKRKVLHGADRDVVWLQRDFGIYICNLFDTGQASRVLKL ERNSLEYLLHHFCGVAANKEYQNADWRLRPLPEEMLRYAREDTHYLLYIYDLMRKKLSSM PRESEESDLPLVEVYKRSYDVCLHLYEKELLTESSYFYVYGLQGSGFNAQQLAVAASLFE WRDIVARAEDESTGYILPNKTLLEIAKQMPVTINKLRRLLKSKHSFIERNLASIVTIIRH SMLNSSAFEEAAERLKEVRTEAASEENTSANEHQETNMPDTSNLRYAIPIVKDSAVDNTA SDQICSSSSQSKVAPLEHGYRPFVPGKCVMVDHSMHPVLNGMGPTTSELGEHSNGDKYPV AQVTGVNITLQKKTNRGGLGSLLGNSAPKRKLDTDTKDKEENKLDKIRSSVTLPFHSFLG TSEPLKSVVEPTTMTALKAQNSEAPAAESTKSSNIELPVMPVSKPCPTDEIIMLEDDSDD EDEELHPVAEAATDEPKLKGFSASSPLEIDDDDDNNDDEPMSLSELSSSFQKCLNSNEQA MNLQETDDSGKQSGFLQIKPFDYEAARKQIEFGEDLEEDSKREDDKDPKASKNTGAKSDL DLNRVHKNSESVELPQGKRRHAFPATGNRSATFR NT seq 2805 nt NT seq  +upstreamnt  +downstreamnt atggacgtcgatcagtctgattcacagaaggctcagactctgcaatccctaaccagtggt tctctcggttcgtctttgtcgaagctcgccggctcttcccagggtattccggctggcaaa gactttcacttttattacaactttgatgaattcaaaatcccgatacggagcatcgaccgg caatctcagtcgatgctcgagaccattggctcgtccgctgaagtttggggcaaggaaatg gcgttccccgaggataacgacgacgcgtatgattggttggttaatgttaacgatgagatt ttggagcggttcgatgtgtcgctggacgagtttcagaggattcgaaaggaggaggaggag gagagtgggagggcagtggctttgacggcggacgctgatgatgggtttcagttggtgtgt gggaagaagaagaagagtccgagtcatggagacgaggtgcacgattcttttgagtctagt gtgaaggttgctaccaaagacaggagaactttgggggtgaagccgaaagtgccatttcat ataccgactatccgtagaccgcaggacgagtttaacattttggttaataatgcaaatcag ccatttgagcatgtctggttgcaaaggagtgaagatggctcgcggtttgtacatccactg gagaagctatctgtattggactttgtcgataagattaatgaagattttcaacctgtttat ccaccatctttggattgcacccctttcaaattcattgaggaagttaatgatttgaaagaa ttggcagctaaattgcgacgggagaacgaatttgcggttgatttggagcataatcagtat cgatcttttcaaggacttacctgtctgatgcaaatttctacaagaactgaggattttgta gttgatacattgaagcttagaattcatgtggggccctatttgagagaggttttcaaggat ccttcaaagagaaaggtgctgcatggagcagaccgagacgttgtgtggcttcaacgggat tttgggatttatatttgcaacttatttgacactgggcaggcttcaagagttttgaaactg gaaagaaatagtctggagtatctccttcatcacttttgtggtgttgcagctaataaagag taccagaatgcagactggagattaagacctcttcctgaggagatgctgagatatgcaagg gaagatacacattatttgctatatatttatgatttgatgaggaagaagctgtcctcaatg ccccgtgaatctgaagaatctgatcttcctttggtagaggtctacaagcgaagttatgac gtatgcctgcatctttacgagaaggagcttttgacagaaagttcatatttttacgtatac ggattgcagggttctggtttcaatgctcaacagcttgctgttgctgctagtctctttgag tggcgagatattgttgctcgtgcagaggatgaaagtactggttacatactgccaaacaaa acgcttctggaaatcgccaagcagatgcctgtcaccattaacaaattacgtagattactg aaatcaaagcattcattcattgagcgcaatcttgcttcaattgttaccatcattaggcat tcgatgctgaattcaagtgcatttgaagaggctgctgagcgtttgaaggaagtccgtacc gaggcggcatcagaagaaaacacatcagctaatgaacatcaagaaactaatatgcccgat acttcgaatttgagatacgcaatcccaattgtgaaagacagtgctgttgataatactgcc agtgatcagatctgttcgtcctcttctcagtctaaagttgctcccttggaacatggatac cggccctttgtacctggaaaatgtgtaatggtagaccactcaatgcatcctgttctgaat gggatgggcccaacgacatcggagctgggcgaacattccaatggcgataaatacccggta gcgcaggttactggagtgaacattacgttgcaaaagaaaactaaccgaggcggtcttggt tcgctattgggaaactcggccccaaagagaaaattagatactgatacaaaggacaaggaa gagaacaagttggataaaatccgatcttctgtgactctaccctttcattcattcttggga acgagtgaaccattaaagtccgttgtagaaccaaccaccatgactgcattaaaagctcaa aattccgaagcacctgctgccgagtcgacaaaaagctcgaatatagagctacctgtaatg ccagtctcaaaaccctgcccaacagatgagattatcatgttggaagatgattcagatgac gaagacgaagaattgcatcctgttgcagaagcagccaccgatgagccaaagttgaaaggt tttagtgctagttcacctcttgaaatagacgacgacgacgacaacaacgacgacgaacca atgtctctgtccgaattgtcttctagctttcaaaaatgtttgaattctaatgaacaagct atgaaccttcaagaaactgacgattcaggaaaacaaagtggttttttgcagatcaaaccg ttcgactacgaagcagcaaggaaacaaatagaatttggagaagatttggaggaagactcg aaacgtgaggacgacaaagatccgaaggcatcgaagaacactggggcaaagtcagattta gatctgaatcgagttcacaagaacagtgaaagcgtggaattaccgcaaggcaaacgacgc catgccttccctgctaccggaaaccgaagtgcaactttccgctaa

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