Cucurbita moschata (crookneck pumpkin): 111453689
Help
Entry
111453689 CDS
T05248
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111453689
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cmos01009
]
111453689
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111453689
Protein phosphatases and associated proteins [BR:
cmos01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111453689
Spliceosome [BR:
cmos03041
]
Common components
Common spliceosomal components
SR proteins
111453689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_DEAH11
CoV_nucleocap
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111453689
NCBI-ProteinID:
XP_022950652
UniProt:
A0A6J1GFF0
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MADSHRKRYSRSPSPWRAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVN
NPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANR
CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFRED
YGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGSR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctcatcgcaaaaggtactctcgatctccttctccctggagagctccttca
agatcaagatctagatcacgatctaggccaaggtctagatccagatcgtggtcaaggcca
aggtcccgaagtcgtggaagatcaagatccagaagtcgaggaaggggggagaatgtcaat
aaccctgggaatacgctttatgtcactggcctatctacaagggtcactgaaagagacctt
gaagaacacttttccaaggagggcaaggtatcttcttgtttccttgtggttgaacctcga
actcggatttcccgtggttttgcatttgtaacgatggacaatgttgatgatgctaatcgg
tgtgttaagcatctcaaccagtcaattctagaaggtcgatatataactgtggagaagtca
cggaggaaacggccaagaactccaacgccaggacactacttggggttgaaaagcaccaga
gactctggctaccgtggcgaacgaggtagcaggtatcgtggtggctccttccgcgaggac
tatgggcatcgtcgatccccaagacgctcgccatatcgaggggcccgagagtactcccct
agacactcaccgcctccatatggtggtgggagatcaaggagggatcactctaggtcgcct
ccttactctccttacggcggcggcagcccagataggaggtatcctcgtggctctaggtga
DBGET
integrated database retrieval system
