Cucurbita moschata (crookneck pumpkin): 111454003
Help
Entry
111454003 CDS
T05248
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
111454003
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
111454003
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
111454003
NCBI-ProteinID:
XP_022951032
UniProt:
A0A6J1GGK0
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MPPLGVQLSIAEHQVTMDNGIVQVTLSNPDGIVTGIRYNGVDNLLEVLNDESNRGYIMNE
KLASYKYWDLVWNPSASATGSFDVIKATDFEVIVENEDQVELSFTRKWDLSLEGKLVPLL
IDKRFIMLRGSSGFYSYAIYQHLKEWPGFNLGETRLAFKLRKDKFHYMAMADNRQRSMPL
PDDRSPPRGRALAYPEAVLLVDPIESELKGEVDDKYQYSCDNKDSGVHGWISTDPPIGFW
LITPSNECRSGGPVKQNLTSHVGPTTLAVFISAHYTGEDLVPKIGAGEAWKKVFGPVFIY
LNSTYDSSDALQLWEDGKSQASIEVQSWPYSFPASEDFPKSNQRGNISGRLLVKDSYVSE
DYIPANGAFVGLAPPGDVGSWQRESKGYQFWSRADEDGYFFIDHIRPGDYNLYAWVPGFI
GDYRYDSIIDILEGSQIDVDEIIYEPPRAGATLWEIGVPDRSAEEFYVPDPNPNYVNKLY
LNHSDKFRQYGLWERYSELYPDADLVYTVGVSDYTKDWFFAQVTRKTENGTFKGTTWQVK
FELDNVDSQATYKLRVALASASIAELQVGVNDPKAKPVFSSGLIGRDNSIARHGIHGLYW
LYNVNIPGNRLVSGDNTIFFTQPRSTSPFQAIMYDYIRLEAPPPPSSAHGLL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgccgccactgggtgtgcaactctccattgcagaacatcaggtgacaatggacaatggc
atagtccaagtcacgttgtcaaacccagatggcatagtgaccggaattcgatacaatgga
gttgacaacttgctcgaagttctcaatgacgaatctaacagagggtatattatgaacgaa
aaacttgcttcatataagtactgggacctcgtgtggaacccatcagcctctgcaactgga
tcgtttgatgtgataaaggctacagattttgaggttatagtggaaaatgaagaccaagtg
gagctctcctttacgagaaaatgggatctgtctctcgagggaaagcttgtgccgttattg
attgataaaaggtttataatgcttcggggttcatctggattctattcgtatgctatttac
caacacttgaaagaatggcctggtttcaaccttggtgaaaccagactcgccttcaaactc
agaaaagacaagttccattatatggccatggcagacaacagacagagatccatgccactt
ccagatgaccggtcaccaccgagaggccgagctctggcctatccagaggctgtcctgctc
gtcgaccccatcgaatccgagcttaagggagaggtggatgacaagtatcaatattcatgc
gataacaaagatagcggcgtccatggatggatatccaccgacccgccaatcgggttctgg
ctaatcacccccagcaatgagtgccgttccggtggacccgttaaacagaacctgacttcg
cacgtcggcccgaccactcttgctgtttttattagcgcccattacacgggagaggatctg
gtgccgaaaatcggagccggcgaggcatggaagaaagtcttcggtcctgtgtttatctat
ctcaactccacttacgattctagcgacgcccttcagctctgggaagatggcaaatcacag
gcatcgattgaagtccaaagttggccatacagcttccctgcttcggaggattttccaaag
tcaaaccaacggggtaatatcagtggcagactattagtcaaagatagctacgttagtgaa
gactacattccagcaaacggtgcgtttgttggcttagctccaccaggagacgtaggttca
tggcaaagagagagcaagggttaccaattttggagcagagcagatgaagatggatacttt
ttcatcgaccacataaggcctggcgactacaatttatatgcatgggtccccggtttcatt
ggagattatcgttacgattctatcatcgacatattagaaggtagtcagatagacgtggat
gagataatatacgagcctccaagagcaggggcgacactgtgggaaattggagtcccggat
cgctcagcagaagagttctatgttccagatccaaatcccaactacgtcaataagctctat
cttaaccattccgataagtttcgccagtatggtctgtgggaaaggtacagcgaattgtat
cccgatgcagacttggtgtataccgtcggcgtcagtgattataccaaggactggttcttc
gctcaggttaccaggaagacagaaaacggaacattcaagggaacaacatggcaggtgaag
ttcgagctggacaacgtggacagccaagcaacttacaagcttcgggtcgcactggcctcc
gcttctatcgcggaattgcaggttggagtaaatgacccgaaagcaaagccggtgttctca
agtgggctaatcggaagggacaattcgatcgctagacacggcattcacggcctgtactgg
ctctacaacgtgaatattccgggaaaccggctggtctccggcgacaacaccatcttcttc
acgcagccgagaagcaccagccctttccaagccattatgtacgactatattcgtctggaa
gctcctccgcctccgtcctccgcccatggtttgttataa
DBGET
integrated database retrieval system
