Cucurbita moschata (crookneck pumpkin): 111454138
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Entry
111454138 CDS
T05248
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111454138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111454138
Enzymes [BR:
cmos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111454138
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111454138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
111454138
NCBI-ProteinID:
XP_022951240
UniProt:
A0A6J1GI72
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MVVKFFENQDYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNRKLRIWLGK
PELYPPQKERNLRTMREALLPSECRQAKISYTGKLMADVCFQYDEKAVIREKFNFGQFPV
MLKSKLCHLRGLDPKKLVSYKEEASEMGGYFIMNGLERVVRLLIAPKRNYPMSMVRNSFA
DRREGYTDKAVVIRCVREDQSSVTVKLYYLRNGSARLGFWVQGKEYLLPIGVVLKALIDT
TDHEIFASLTSCYSDKHEKGKGAVGTQLVGERAKIILDEVRDLALFDHRQCLEHIGQHFQ
PVMEGMEKEKMSTIADAVFKNYIFVHLDNNYDKFNLLIFMAQKLFSLIDQTSVPDNPDSL
QNQDVLLPGQLITIYMKEKLEDWLQKVKKLLQDELSDSSKNFDFCSLADVKKVMDKNPSK
QISSAIDNLLKTGRLVTQTGLDLQQRAGFTVQAERLNFLRFISHFRAVHRGASFAGLRTT
TVRKLLPESWGFLCPVHTPDGEPCGLLNHLTSTCRITSYFNSQGKVRDFFKIRASILSVL
IAVGMIPSLPKLVQMGPPDVLNVILDGRIVGYISSGEVEKVVAHLRQLKVSSPHVIPEDL
EVGYVPLSICGAYPGLFLFTSPSRFVRPVRNLSISSEENLNIELIGPFEQVFMEIRCPDG
GDGGRKDEFPATHEEIHPTGMLSVVGNLTPWSDHNQSPRNMYQCQMAKQTMAFSLQAIQF
RADQKLYHLQTPQTPIVRTSTYMKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVE
RGMYHGQIYQTETIDLSEQSSRSSRSQKLFRRSNIDKSVRSHIDSDGLPYVGQMIKPDEP
YCSIYDEVAGTTRNMKLKGSEPVFVDYVSVDVKNKKHPQKVNIRFRHPRNPVIGDKFSSR
HGQKGVCSQLWPDVDMPFSGATGMRPDLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFI
NATPFKSSVKKTNAGDEESKTESLVDELGSTLVKKGFNYHGVEVLYSGVYGTELTCEIFI
GPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLL
HDRLHTCSDHHIADVCSLCGSILTSTLVQPQKRAVREIGGLPPGKAPKRVICHACKTSKG
METVAMPYVFKYLAAELAAMNIRMTLQLSNAAGA
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaaatttttcgagaaccaagactatgaggcgttgcgcgagctgttcagacac
catatagaatcgtttgatcacctcgtcgatgcgggattggagactctcatgaacagcatc
aaacccgtcgaaatttacgactccttcaccaacagaaagcttagaatttggttgggtaag
cctgagttatacccaccacagaaggagcgcaatctgagaacaatgcgagaagctctgctt
ccttctgaatgtaggcaagctaaaatttcatacaccggcaagttgatggcagatgtttgt
tttcaatacgatgaaaaagctgtcataagagagaaatttaattttgggcaattcccagta
atgctgaagtcaaagctttgtcacttgagaggtcttgatcccaagaagctagtatcctac
aaagaagaggcatcagaaatgggtggttatttcattatgaatgggctggagagagttgtt
cggcttttgatagcaccaaaaagaaactacccgatgagtatggtgaggaattcatttgct
gatcgacgggaaggttacaccgataaagcagtggttataaggtgcgtaagagaagatcaa
tcttcagtaacagtcaaattatattatcttaggaatggaagtgccagacttggcttttgg
gttcagggaaaggagtacttgcttcccataggggttgtcctgaaggccctaattgacaca
actgaccatgaaatatttgcaagtctgacaagctgttatagtgataaacacgaaaagggt
aagggtgctgttggaactcagctagttggtgaaagggcaaaaattattcttgatgaagtt
cgagacctggcactttttgatcatcgtcaatgtctagagcatataggacaacacttccag
ccagtcatggaggggatggaaaaagaaaaaatgtccactattgcagatgcagttttcaaa
aactacatatttgttcacctcgacaacaattatgacaagttcaatctcctcatttttatg
gcgcagaaacttttctcccttatagatcagacgtctgtacctgacaatcctgattccttg
caaaaccaagacgttctgctacctggtcaactgattactatttatatgaaggagaaacta
gaagactggttgcaaaaggtgaaaaagcttcttcaagatgaacttagcgattccagcaaa
aattttgatttctgcagcttagctgatgtcaagaaagtcatggacaagaatccgtcaaaa
cagattagttcagctattgataatttgctgaaaaccggaagactggttacacaaacaggc
ctagatctgcagcagagggcaggctttacagttcaggcagaacgacttaattttttgcgc
tttatatctcattttcgcgctgttcatcgtggagcttcatttgctggacttcgcaccaca
acagtgcggaaattgctacctgagtcctggggttttctttgtccagtacacactcctgat
ggtgaaccatgtggcttgttgaatcatttaaccagcacttgcagaattacatcatacttc
aattctcaaggaaaagttagagacttcttcaaaataagggcgtctattttgagtgtccta
attgcagttggaatgataccgtcactaccaaagcttgttcaaatgggtcctcctgatgtt
cttaatgttattttagatggtcgcatagttggttatatatcatctggtgaagtagaaaaa
gttgttgctcatttacgacaattaaaagtttcatctccccatgtgattcctgaagatctg
gaagttggatatgtaccattgagtatatgtggagcatatcctggtttattccttttcaca
tctccttctagatttgttcgaccagttagaaatctttcaatatcttccgaggaaaatcta
aatatcgaactcattgggccatttgaacaggtatttatggaaataagatgtcctgatggg
ggtgatggtggcaggaaagatgagtttcctgcgacacatgaagaaatccatccaactggg
atgctcagtgtggttgggaatcttaccccttggtcggatcacaatcagagcccgcgtaat
atgtaccaatgccagatggcaaaacaaacaatggcattctctctgcaagctattcagttc
cgtgcagatcaaaagctataccatcttcagactcctcaaacccctatcgttcgtacaagt
acatatatgaaatacaacatagatgaatatccaaccgggacaaacgcaatagtggcagtg
ttggcatatactggttatgacatggaggatgcaatgattttgaacaagtcctctgtggag
cgtggaatgtaccatggacaaatttatcagacagaaaccattgacttgtctgagcagagc
agtagatcaagtcgcagccaaaagttgtttaggaggagtaatatagataaatctgtgcgg
tctcatatagattcggatgggcttccttatgttggtcagatgataaaaccagatgagccc
tattgtagcatttatgatgaagtggcaggcacaactagaaacatgaaacttaaaggttca
gaacctgtatttgttgattacgtgtctgttgatgtaaagaataagaagcaccctcaaaag
gtgaatatacgcttccgacatccccgaaatccagtgattggagataaatttagtagtaga
catgggcagaaaggtgtttgctcccagctatggccagatgttgatatgccattttctgga
gctacaggaatgcgtcccgatttgattatcaatccacatgcttttccttcgagaatgaca
attgcaatgttaatggagtctgtcgctgctaagggaggctgtttaaatggagaatttatc
aatgcgacgccgtttaagagttcggtaaagaaaacaaatgctggagatgaagagtctaaa
actgaatcacttgttgatgaacttggctccacattagttaaaaagggattcaattaccat
ggtgttgaggtattgtacagtggagtttatggaacagagctaacatgtgaaatttttatt
ggacctgtatattatcagcgtcttcggcacatggtttctgataaatatcaggttcgttcg
actggaactgtagatcaagtcactcgacagcctatcaaaggtaggaaaaaaggtggtggc
atacgttttggtgaaatggagcgtgactcaatgctggcacatggagcatcttacttatta
catgataggcttcatacatgttctgatcatcacattgctgatgtgtgttcgctttgcggt
agcattcttacatcaactttagtccagccccagaagcgtgccgtgcgcgaaattggtggt
cttcccccggggaaggctcctaaaagggttatatgtcatgcttgcaaaacaagtaaaggt
atggagacagtggccatgccttatgtcttcaagtacctggccgcagagttggctgcaatg
aacataagaatgactctccagctaagtaatgcagcaggagcctga
DBGET
integrated database retrieval system
