Cucurbita moschata (crookneck pumpkin): 111454255
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Entry
111454255 CDS
T05248
Name
(RefSeq) uncharacterized protein LOC111454255 isoform X1
KO
K24155
rabconnectin-3a
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
111454255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111454255
Membrane trafficking [BR:
cmos04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
111454255
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
111454255
RAVE complex
111454255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_C
ANAPC4_WD40
EIF3I
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Tuberin
Motif
Other DBs
NCBI-GeneID:
111454255
NCBI-ProteinID:
XP_022951443
UniProt:
A0A6J1GHN3
LinkDB
All DBs
Position
Unknown
AA seq
2515 aa
AA seq
DB search
MAGTASEIDPIYRLPLPLLGSEPIPSAPNRFAGSSIDWIPDFAGYAWVAYGASSVLVISH
FPSPLSPQETTIGPIFRQVLELSGDDLSVVNAVSWSPVLPSEGELAAAVGNRIWVFSHDL
GASRGSFCWRQNSVLLQSLKVEAIQWTAAGDGIIAGGVEVVLWKNTNRSWEIAWKFKPDV
PQTLVSASWSTEGPFATASQARISKMDNTFIDKACRSVLVCQSEGEYGHVKSELCHPLPI
TMIQWRTSIKEKGSSKNTPRHVLLTCCLDGTVRLWSETENGKVKKFSKDVNSKKSLRRRF
SVAAVIEVNQALNGTLGTDLFVTWATEIRGMCKPFELTKKVFSEGFEHNRAGSCEWLISL
GPGSLVTFWAVHCLDDVSPLRFPRVTLWKKQELKGLEVGRHYIDGCTNLSNKFLLKKVVI
SRIYPSGSPSMCSLIQLLPCNSLVWSILSSQTSTDVGDVSFDKKRSDNFFSRSVTTQLNL
SGHAGKILHVAVHPYNCEVKVAASLDSNGLLLFWSLSSISTCVLGPPTLNHTWELCGKLV
TQDSCSKYTSVQWAPSILDEELILLMGHARGIDFFAVRISQSDGENTECHYLCTIPFTGH
GPFENGPTDIFSISLPSDCNTTYRFNKFMLIGLWMEGFQALSWEITLHTYDIFGTGVHCN
CGIDDENIAELSILTFESSFGSKKYCVSIIPCSSQFPNSQIHEQITSFAVVHQGTFVPVQ
QKLTSSGEPYTPAYIMATGSADGSLKLWRSNVGKPSIFHVSWELVCVVVTHQGPITALCL
TDCGRKIATISKNSHKPNISNVRLWELACLGAGTLLFEDELSFESSIIAVDWLTLGNGQF
LLGICLQNELRVYSLKHFGQTLSGITKSLDTETWICIGFARTLPSNCGFLWGPKSTAIVI
HDHYFCIVSPWLFLGDKNHDAMCSPYYIGETKNHHVNGTDVAVFADECCSIRKLSDDNYD
SKRRPRSLTNIHAETNILSNSSYPRGAQMKSTTSLGLISMPDIADKLCGSLSSFHPHALL
VNIYSGKWKRAYSALSHLIEHLSSDKKSSANPTNTIPEILLSDYFEGVAKTSTDKEVQWS
MNGLASQFKEGVSPWTFNWDSISNDSSFIPSSTKSEFSTFIEPLEKFYESAGLTSMEKTE
TLAIIDLLDEISNKSSASAYESLDEPGRRYWIALRFQQLRFLRRDGRSASLEELTIDSRL
IGWAYHSDCQQNLLDSVISKEPTWQEMRSLGVGIWFTNTTQLRARMEKLARSQYLKKKDP
KDCMLLYVTLNRIQVLAGLLKISRDEKDKPLVGFLSRNFQEERNKAAALKNAYVLMGKHQ
LELAVAFFLLGGDTSSAIRVCAKNLGDEQLALVISLLVEGRGGPLQQHLITKFMLPSAIE
KGDTWLASILEWELGNYSQSFLNALGLESESNSVTGIPFLSSRHISLQDPSVGLYCLLLA
TKNSMKKAVGEQSAEVLCRIATLMTATALNRCGLPLEALEQMSTCGSITEVSDGTNGVDI
LCFETIRKICKQSPRDSSSWLSVEFAVHLEYRAKLDLAVQYFSKLIRKHPSFPTINLESV
GCMGCLKEYEMDYEKSLERFQRKLNVGFAQFEMKFSLLPASLVSMMLVFLCNVGLQFIGY
DIFHGFASQECPDDKNQKIYTFLLHPLVHKSLLKTAQEILFSASRYTIACSLSFHKGETG
SKCFDTWWYYLQGLLLSLQGLRAALRITHGSLKDDLVSKLLTILDLVEYNLYFTSAWLLR
DSKCLLKMLQPLLANARSPHDIDVEHLKQLLPQIGELIAQNLLTDVDYNHQILEGMPNAQ
SDDIVHSIPGDERWHIIGAVLWHHMSKFMKHKLITLTNASKEGSLSSIILGNLDTWAQSL
STIKSDWKAISKDVIELVSVSLTALLTIVLAQVSSYQLKQLVSSLQYKLDQKLYVATAVW
FEQICQSLSSHDKGHTDEIYDMDMCIRGEFETLWNVTSNPNLISDCFTHEKVHMLHCFDR
KLSERWSDIYNGITRKEHNCTHEAAHISRSVSDATGSPGKLLRNGKTLVRSDKELATLDD
AMPFQKPKEIYRRNGELLEALCINSVDQRQAAVASNKKGIIFVSWEDGMASRDDEDYIWS
NSEWPLNLNGWAASESTPAPTCVFPGVGLGSSKGAHLGLGGATLGVGSSVRPGRDLTGGG
AFGISGYAGVGASGLGWETQEDFEEFVDPPATAEHTNSRAFSSHPSRPLFLVGSTNTHVY
LWEFGKNRATATYGVLPAANVPPPYALASISSVQFDQCGHRFATAALDGTVCSWQLEVGG
RSNVRPTESSLCFNGHASDVTYVTSSGSIIAVAGYSSTAVNVVIWDTLAPPKTSQAAIMC
HEGGARSISVFDNEIGSGSVSPLIVTGGKGGDVAIHDFRYVVTGRTKKQKNCSKDEMISN
ASNSDMPSTVGEQNLNGMLWYIPKAHSGSVTKISSIPNTSLFLTGSKDGDVKLWDAKRAK
LVHHWPKLHDRHTFLQPSSRGFGEVVRAAVTDIQVISSGFLTCGGDGLVKLVQFG
NT seq
7548 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaacggcctcggagatcgatcctatctatcgtctccctctccctcttttagga
tccgagccgatcccttccgccccgaatagattcgctggttcctccatcgactggattcca
gattttgctggctatgcatgggtcgcttatggagcctcatccgttttggtgatttctcac
ttcccttctcctctgtctccccaagaaaccacaattggacccatatttcgccaggtactg
gagctctctggcgacgacttatctgttgtcaatgccgtatcttggtctcccgtattaccg
tcggagggcgagctcgctgcagctgtgggcaaccggatatgggtgttttctcatgatttg
ggtgcttctcgaggttctttttgttggaggcagaattccgtgcttctgcaatctttgaag
gttgaggccattcagtggacggctgcaggagatggaattattgctggtggagtagaggtt
gttttgtggaagaacactaacaggtcctgggaaattgcttggaagttcaaaccggatgta
ccccaaactcttgtttccgcaagctggtctaccgagggaccatttgcaacggcatctcaa
gcaaggatatcgaagatggataacacgtttattgataaagcttgccgatctgtgctggtc
tgtcagagtgaaggggagtacggacatgtgaaaagcgagttatgccatcctctacctata
actatgattcaatggaggacttcaattaaagagaaaggaagttccaagaatacaccaaga
catgtgcttctgacatgctgcttggatggaactgtgagattgtggagtgagactgaaaat
ggaaaagtaaaaaaatttagtaaggatgtaaatagtaaaaagtcattgagaaggcgtttt
tctgttgctgctgtcattgaggtaaatcaggcattgaatggaactcttggcacggattta
tttgtaacatgggcaaccgagattagaggtatgtgcaaaccttttgaattaactaagaaa
gttttctccgaaggattcgaacacaacagggctggaagctgtgagtggctaataagttta
ggtccgggatcattggttactttttgggctgtacattgtcttgatgacgtatccccatta
agattccctcgagtcacattgtggaagaagcaagagctcaaaggacttgaagttggacgg
cattacattgatggttgtacaaacttgagtaacaagtttctcctcaagaaagttgtaatc
tcaaggatttatccgtctggttccccaagtatgtgttctttgattcagttgttgccttgt
aattccttggtgtggtcaattttatcttctcagacatcaactgacgtaggggatgtatcc
tttgacaaaaaaaggtcagacaatttcttctctcgttcagttactacccaattgaattta
agtggtcatgctggaaaaatcttacacgttgctgtacatccatacaactgtgaggtcaaa
gtagctgcttctttggactctaatggcttgcttcttttctggtcactatctagtatctcc
acctgtgtattaggccctccaacacttaatcatacctgggaactttgtggaaaactcgta
actcaagattcatgctcaaaatatacaagtgtgcagtgggcaccatcaatattggatgaa
gaactgattcttctgatgggacatgcgagaggaattgatttttttgctgttaggattagc
caaagtgatggagaaaatactgaatgtcactacttatgtaccatacctttcactggtcat
ggtccttttgagaatggtccaactgatatattttctatttctttgccttctgattgtaat
acaacatatagattcaataaatttatgttaatagggctatggatggaaggatttcaggca
ctatcatgggaaatcaccttacatacttatgatatctttgggactggagtacattgcaat
tgtggtattgatgatgaaaatatagctgagctcagtatattgacatttgaaagttctttt
ggaagcaaaaagtattgtgttagtataatcccttgctcatcacagttcccaaattctcaa
attcatgagcagattacaagttttgccgtggtgcaccaaggaacttttgttcctgtgcag
caaaaattaacttcttcaggtgaaccatatacccctgcatatattatggctactggctct
gctgatggaagtttgaaactttggagaagcaatgtaggcaaaccatcgatctttcacgtg
tcttgggagcttgtttgtgttgttgtcactcatcaaggccccattactgcattgtgtttg
accgattgtggacggaaaattgcaacaattagcaagaacagccataaacctaatatcagc
aacgttcgcttatgggagcttgcatgccttggtgcagggacccttttgtttgaagatgaa
ctgtcctttgaaagcagtatcattgcagtagactggttaactttaggaaatggtcaattt
ttacttggaatttgtttgcaaaatgaattgcgtgtgtactccctgaagcattttggtcag
accttgtcaggcatcacaaaatctttggatactgagacttggatctgcattgggtttgct
cgtactttaccatctaattgtggcttcctctgggggccgaagagcacagcaatagttata
catgatcattacttttgtatagttagtccatggctgttccttggggataaaaaccatgat
gctatgtgcagcccttattacattggagaaactaaaaatcaccatgtcaatgggactgat
gtcgctgtttttgctgatgaatgttgcagtatcagaaaattatcagatgataattatgac
agcaaacgtagaccaagatctctcacaaacattcatgctgaaaccaatattctatcgaat
agttcgtatccacggggtgcacagatgaaaagtacaacttcgcttggtcttataagcatg
cctgatatagctgataaactgtgtggatcactgtcctcttttcatcctcatgctctcctc
gttaatatatattcaggtaagtggaaacgtgcatattcagctttgagtcatcttattgag
catctttcttctgataaaaagagctctgcaaacccaaccaatactattccggagatcctt
ttgtcagattattttgaaggagttgcgaaaacttctactgataaagaagttcagtggagt
atgaatggcttagcatcccaatttaaggaaggtgtttcaccatggaccttcaattgggat
tctattagtaacgacagctcattcattccgtcctctacgaaatctgaattcagcaccttt
attgagcctcttgagaagttctatgaatcagcagggctaaccagcatggagaagacagaa
actctagcaattatagatcttcttgatgaaatcagtaataaatcttctgcatctgcctac
gaaagtcttgatgagcccgggagaagatattggattgctttgaggtttcaacaactgcga
tttcttcggcgtgatggtagatcagcatctctggaagagctgaccattgattcaagattg
attggatgggcctatcactctgattgtcagcaaaatctattggattcggttatctctaaa
gaaccaacatggcaggaaatgcgaagtttgggtgttggaatttggtttactaatacaaca
cagttgcgtgcaaggatggagaaactggcgagatcccaatatctgaagaaaaaagatccc
aaggattgtatgcttctgtatgtcacactgaatagaatccaagttttagctggcctttta
aaaattagcagggatgagaaagataaacccttggtgggatttctttcacgcaattttcag
gaggagagaaataaggcagcagctttgaagaatgcctatgttttaatggggaaacatcaa
ctggaattggctgttgctttttttttgcttggtggtgatacttcttctgctatcagagtc
tgtgcgaaaaatcttggggatgagcagcttgcactggtaattagtcttttagttgaaggg
cgtggtggacctcttcagcaacacctaataacaaagttcatgcttccatctgccattgag
aagggtgatacctggcttgcaagcattcttgagtgggaattaggaaactactctcaatct
ttcctgaacgcgcttggtttggagtcagagtcaaattctgttactgggataccgtttctt
tcaagtagacatatttctttacaagacccaagcgttggtttgtattgtctattgttagca
accaaaaatagcatgaagaaagcagttggagagcaatctgctgaggtcctttgtcggatt
gcaaccttgatgacggctactgctttaaacagatgtggtcttcctcttgaagctttggaa
caaatgtcaacctgtggaagcattactgaagtttcagatgggactaatggagtcgatatt
ctgtgttttgagactataagaaaaatctgtaagcaatcgcccagagattcctccagttgg
ctctctgttgaatttgcagtccatctggagtatcgagcaaaattggatttggcagttcaa
tacttctcaaaattgataaggaagcatccaagctttccaactataaatttagaatctgtt
ggatgcatgggttgcttgaaggaatatgagatggattatgagaaatctcttgaaaggttt
cagcgtaagttaaatgtagggtttgcacagtttgaaatgaagttctcgttgcttcctgcc
tctcttgttagtatgatgttagtctttctgtgtaatgttgggctacaatttattggatat
gatatatttcatggatttgcttctcaagaatgcccggatgacaagaaccagaagatttat
actttcctcttgcatcctctcgtgcacaagtcactactcaaaacagcacaagaaatttta
ttttcagcttcacggtacactattgcttgcagtttatcttttcacaaaggcgaaacaggg
tcaaaatgtttcgatacttggtggtactaccttcaaggtctcttactatccttacagggt
ttaagagctgctttgagaattacacatggttctctcaaagacgatcttgtttccaagctc
ctgaccattcttgatttggttgaatataacttatatttcacgtctgcttggctattgaga
gactcaaaatgtctccttaagatgctgcaaccactcttggcaaatgcacgatctcctcat
gacattgacgtggaacatctgaagcaactcctccctcagattggagagttgatagctcaa
aatttattgaccgatgtagattataaccatcagattttggaaggcatgcctaatgcacaa
agtgatgacattgtgcattcaattccaggagatgaaagatggcacattattggggctgtt
ttgtggcatcacatgtccaaattcatgaaacataagttgattactttaactaatgcatct
aaggagggtagcttgagcagtatcattcttgggaaccttgatacatgggctcaaagtctt
tcaaccattaaatctgattggaaagccatttcaaaggatgtgattgaattggtatcagtg
agtcttactgctctactgactatcgtccttgctcaggtttcttcttatcaactaaaacaa
ttggtatcatctctgcaatataaattagatcagaagctgtacgtggcaactgctgtttgg
tttgaacagatttgccagtctctatctagtcatgacaagggccatactgatgagatttac
gatatggatatgtgtatcagaggtgaatttgaaacattatggaacgttacttccaatccc
aatctaatatcagactgctttacacatgaaaaggttcatatgttgcattgttttgatcgt
aaactctctgaaagatggagtgatatttacaatggcatcacaaggaaagagcacaattgt
actcatgaagctgcacatattagtaggtctgtcagcgatgccactggatcacctggtaaa
ttacttcgtaatgggaaaactcttgtcagatctgacaaggaattggccacccttgatgat
gccatgccttttcagaaacctaaagagatatataggaggaatggagagcttttagaggca
ttgtgtatcaactctgttgatcaaagacaagctgcagttgctagcaataaaaagggtata
atttttgttagctgggaagatgggatggcctccagagatgatgaggattatatctggtca
aactctgagtggcctctaaatctaaatgggtgggcagcctctgaatcaacaccagctcca
acgtgtgtatttcctggtgttggtcttgggagcagcaaaggggcacaccttgggttaggt
ggtgctactctgggtgtaggatcatctgtaaggcctgggagagatttgactggaggtgga
gcatttggtatttcgggttatgcaggtgttggtgcttctggcttaggttgggaaacacaa
gaggatttcgaggaatttgtagaccctccagctacagcagaacacacaaattcgagggct
ttctccagtcatccttctagacctcttttcttggttggctctaccaatacacatgtatac
ttgtgggagttcgggaagaacagagctactgcaacttatggtgtcttgcctgcagcaaat
gtgcctccaccatacgctctagcctcaatatcatctgtgcagtttgaccaatgtggacac
agatttgctactgctgcattagatgggaccgtatgctcatggcagttggaggttggagga
agaagcaatgtccgtccaacggaatcttctttatgctttaatggccatgcatcggatgtc
acttatgttacttccagtggatcaataatagctgtggctggatatagctctactgcagtt
aatgtggtcatatgggatacactggctccacctaaaacttcccaagcagccattatgtgt
cacgaaggtggtgctcgctctatttctgtgtttgataatgaaatagggagcggttctgtt
tctcccctcatagttactggtggcaaaggtggagacgtggcaattcatgatttccgatac
gtagtcactggtaggactaagaaacaaaaaaactgttcaaaagatgaaatgattagcaat
gcttcgaattctgacatgccgagtaccgttggtgaacaaaacttaaatggaatgctttgg
tacataccgaaggctcactctgggagtgtcactaaaatatcttctatcccaaatacaagt
ttgttcttgaccggaagtaaagatggagacgtaaaactttgggatgcaaaaagagctaaa
ttagtgcatcattggccaaagttgcatgatagacacacttttctgcaaccaagttcccga
ggtttcggtgaagtagttcgggccgctgttactgatatacaagttatctcaagtggattt
cttacctgtggtggagatggcttggtaaagctggttcagtttggatga
DBGET
integrated database retrieval system
