Cucurbita moschata (crookneck pumpkin): 111454257
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Entry
111454257 CDS
T05248
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cmos01002
]
111454257
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111454257
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111454257
Peptidases and inhibitors [BR:
cmos01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111454257
Ubiquitin system [BR:
cmos04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111454257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
111454257
NCBI-ProteinID:
XP_022951440
UniProt:
A0A6J1GIT1
LinkDB
All DBs
Position
Unknown
AA seq
1084 aa
AA seq
DB search
MLVVGDLGFQILVLAACLVFPVFGIVLRRKWRLGMARTEEINRLLVLASEEAARVEIEAS
FGCTAAPISLNLHCAVCLSPTTTRCARCKAVRYCSGKCQIIHWRQGHKTECHPPETSDWS
LEKENDYGDRIANQHHSISYDNKFGIENGQHIEPDEVLYDKLTLPSSDDSVKNVSVELHA
DEEENSTTEFADVALNTESFDDASRSENSSESCSPRSDGYLSAQNSFDKDDSTSRLSIVD
PNKPLSPNYAHLVNSVDKFTKRKTENHPAFVGIDPVYDNHSRAAEVSIDGSCEATSSFQE
HNGNSIRLKDGVHDDSVPSSINGAKNKKIPGSHSFLHFSFSVSGGTPSDAQVAQVNENVA
DGSLRTTSGINRTAGSNLQSDINIDSSEVRNSPSSCEGSGDKDNTAKELSDHPVVYLMIS
SSPRISPFPAVSKSESRSVRNSNTRMSAPLKSERSCPVFIQPDNSKIVSKHSGNGSLVND
SSVHLPTISSRESVPPTDSRKVGPTQVGAGVSSLDANFSRKSAYGFRPFALNEIKSKSDH
SYVTNDSENAGKYNYKGHLPFELLVDLYNWNKVELQPSGLVNCGNSCYANVVLQCLIFTP
PLTAYFLRGLHSKACAKERWCFTCEFESLILEAKEGKSPLSPFRIISQLRKIGSQLVNGK
EEDAHEFLRCAIDTMQSICSMEAQVSRSGPMEEETTLIGFTFGGYLLSKIKCTRCENKSE
RIERILDLTVEISGDIETIEEALQQYTSIEILDGDNRYHCGRCKSYVKANKRLSILEAPN
ILTIALKRFQSGKFGKLNKPVIFSEILDLAPYMSSRSDKSPEYRLYGVIVHLDVMNAAFS
GHYVCYIRNNQNKWFKIDDSTVTAVEFENVLTRGAYMLFYARCSPRAPRLIRSKVMTDSK
EGCIPSLISGKSTSFKPSPNSTYPDSQNPHIYNNSSNDSSNISSFYRKFHQLQKLLEDDL
TSDSSSLLSSNSDESSFSTNSSSDSTSTEDLPEYIYSDSGCGWNGLQNRSDTNSSLPSSS
SSSSSPLLHPADSSQYAPVRAKTTESRPARPYQTNGISNLTSRRESTCREKAMHLMEDKK
NGWR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtcgttggagatttagggtttcagattctggtccttgctgcttgtttggttttt
cccgtttttggtattgttcttcgtcgcaaatggcggcttggtatggccaggaccgaagag
atcaaccggctcttggttttggcgtctgaggaagctgctagggttgaaattgaggcatcg
tttgggtgtactgctgcgccgatttctctgaatcttcattgtgctgtttgtctcagtccc
acgaccacccgttgcgctcggtgtaaagcagttcgatactgttctggcaaatgtcaaatt
attcactggcgacaaggtcataaaaccgaatgccatccacccgaaacgtctgattggtct
ttagagaaggaaaatgattatggggataggatagcaaaccaacaccactctattagttat
gacaacaaatttggtattgaaaatgggcaacatatagaaccagatgaggtattgtatgac
aaacttacattacccagctctgatgactctgtaaagaatgttagtgtggagttgcatgca
gatgaggaggagaattcaactacagaatttgctgatgtcgcattaaacactgaatcattt
gatgatgcctcaagaagtgagaacagtagtgagtcttgttccccacgatctgatggatat
ttatctgctcaaaactcctttgacaaggatgattctacatccagattatcaattgttgat
ccaaacaagccattatctcctaactatgctcacttggtaaactctgttgataaattcact
aaacggaaaacagaaaatcatcctgcattcgttgggattgatccagtttatgataaccat
tcaagggctgctgaagttagtatagatgggagttgtgaagctacttctagttttcaagaa
cataatggaaattctattcggttgaaagatggtgttcatgatgactctgtcccatctagt
attaatggtgccaagaacaaaaaaattccgggaagtcattcgttcctacacttttcattc
agtgtgtctgggggtactccatcggacgcacaagttgctcaagtaaatgaaaatgtagca
gatggaagtcttcgtactacttcggggataaacagaacggctggatctaatttgcaatca
gatatcaatatcgactcttcagaggttagaaattcaccctcaagttgtgaaggatctggg
gacaaagataacaccgctaaggaactgtcagatcaccctgtagtttatttgatgatatct
tcatcacctcgtatcagtccgttccctgctgtttctaaatctgaatcaagaagtgttcgt
aattcaaatacaaggatgtcagcacccttgaagtctgaaaggtcatgcccagttttcatc
cagccggataattctaaaattgtatcaaagcatagtggtaatggatctttagtgaatgat
tccagtgttcatttgcctacaattagtagtagggagtcagttcctccgaccgattctaga
aaagttggtccgacacaggttggtgctggtgtttcttctttggatgcaaacttttcgcgc
aagtcagcttatggctttagaccttttgctctcaatgagattaaatctaaatcggatcac
agttatgtaacgaacgacagtgagaatgctggaaaatacaattacaagggacacctcccg
tttgagctgcttgtcgatctatataattggaataaagtggagctccaaccatctggcctt
gtcaactgcgggaatagctgctatgctaatgttgtactccagtgtttgatattcactccg
cctttgacagcctattttcttcggggactgcattctaaagcatgtgcaaaggagagatgg
tgctttacctgtgagttcgaaagtctaatactcgaggcaaaagaaggcaaatctccacta
tctccgttcagaataatttctcaactgagaaaaattggtagtcaactcgttaacgggaaa
gaggaggacgcacacgagttcttgaggtgtgctattgacacgatgcaatcgatttgctct
atggaagctcaagtaagtcgatctggccctatggaagaagaaacaactctaataggcttt
acatttggtggctacctcctatcaaagatcaaatgcacaagatgtgagaacaagtctgaa
cgaatcgaaaggattttagatcttaccgttgagataagtggggatattgaaacgatcgaa
gaagctcttcaacaatatacaagcatcgagattttagacggggacaatagataccattgt
ggcagatgcaaatcttacgtgaaagccaataaaaggctgtcaatattggaggctcccaac
atcctgactatagcattaaaacgattccagtcaggtaaatttgggaagctcaataagccg
gttattttctcggagatccttgatctcgcaccctatatgagtagcagaagtgacaagtca
cctgaatacaggctttacggagtgattgttcatttggatgtcatgaatgctgcattttct
ggtcactatgtatgctatatcaggaataaccaaaacaagtggttcaagatcgatgacagc
acggtaacagctgtggaatttgaaaatgtactgacaagaggggcatacatgctcttctat
gcaagatgctcacctagggccccaaggttgatcagaagcaaagttatgaccgattccaaa
gagggatgcattccatctttgattagtgggaagagtacctcatttaaaccaagtcccaac
tccacatatcctgattcccagaacccccatatctacaacaattcatcaaatgattcttca
aatatcagttcgttttatcgaaaatttcaccagctccagaagctgttggaagacgactta
acgagcgatagttcttctcttctcagtagcaactctgatgaaagctctttcagcaccaac
agcagcagtgactcaacgagcacggaggacttaccagagtacatttatagcgactctgga
tgtggttggaatggtttgcaaaatcgttctgacacaaactcttctttaccatcgtcatca
tcgtcgtcatcctccccgcttttgcatccagctgattcaagccaatatgcaccagttcgt
gctaaaacaaccgagtctcgacctgctcgtccctaccaaaccaatgggattagtaatctc
acaagtaggcgagaatcaacctgtagagagaaagccatgcacttgatggaggataagaag
aatggctggcgttag
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