Cucurbita moschata (crookneck pumpkin): 111454638
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Entry
111454638 CDS
T05248
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111454638
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111454638
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111454638
NCBI-ProteinID:
XP_022951902
UniProt:
A0A6J1GIX7
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All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MANPIVLLITFVLLLHMYSASSSPVADPEQVVEEVLTSINNATKRRNLGFLSCGTGNPID
DCWRCDPDWEKNRKRLADCAIGFGKGAIGGRNGKFYIVTDPSDKDVVNPKPGTLRHAVIQ
KEPLWITFKRDMVIKLKAELIMNSFKTIDGRGRSVHIAGGPCITIQYVTNIIIHGINIHD
CKQGGNMYIRDSPDHYGWRTLSDGDGVSIFGGSHIWIDHCSLSNCQDGLIDAIRGSTAIT
ISNNYMTHHNKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
HWIMYAIGGSASPTINSQGNRYLAPDNRVRKEVTKREAAAESKWKNWNWKSEGDLMLNGA
FFRKSGAGASSSYARASSLSAKPSSLVSSMTAGAGVLKCSKGSPCST
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccccattgttcttctcataaccttcgttcttcttctccatatgtactctgct
tcttcctctccagtcgccgatcctgagcaagtggttgaagaagttctcacgagcatcaac
aatgcaacaaaaagaaggaacttggggttcctctcctgcggaactggaaacccaattgat
gattgttggaggtgcgaccccgattgggagaagaatcgaaagcggctagccgactgcgcc
attgggtttgggaagggagccatcggcggcagaaacggaaaattctacattgtcactgac
ccatctgacaaggacgtggtgaacccaaaaccaggaactctccgccatgccgtaatccaa
aaagaacctttatggatcaccttcaagcgtgacatggtcatcaaattaaaagcagagctg
atcatgaactctttcaaaaccatcgacggtcgcggcagatcagtccacatcgccggtggg
ccatgcattacaattcagtacgtgacgaacattataatccacggcattaacattcacgac
tgcaagcaaggagggaacatgtacattagagattcgccggaccattacggttggaggact
ctgtcggacggtgatggggtttcgatatttgggggcagccatatttggatcgaccattgt
tcgttgtcgaattgccaagatgggttgattgatgcgattcgtgggtctacggctatcaca
atttcaaacaattatatgacccaccataacaaagttatgcttttgggacatagtgattcg
tacactcaagacaagaacatgcaagtcaccattgcttttaaccattttggcgaggggctg
gtgcaaagaatgccacgatgccgacatgggtatttccatgtggtgaataatgactatacc
cattggattatgtacgccattggtggaagtgcatcgcccacaatcaatagccaagggaac
agataccttgctcctgataaccgagttagaaaagaggtgacaaagcgtgaggctgcagca
gagagcaaatggaagaattggaattggaaatcagagggagatttgatgttgaatggagcg
ttcttcaggaagtccggtgccggagcgtcgtctagctatgcgagggcgtcgagcttgagt
gccaagccatcgtcgttggtgagttcaatgacggcaggagcaggagtgctgaaatgctcc
aagggctccccatgctctacttga
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