Cucurbita moschata (crookneck pumpkin): 111454644
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Entry
111454644 CDS
T05248
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111454644
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111454644
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
DUF3560
Motif
Other DBs
NCBI-GeneID:
111454644
NCBI-ProteinID:
XP_022951907
UniProt:
A0A6J1GIY2
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MIPFRALFLCSLLFVVVYSDAPPDGDKTPDVEVDKINDKGIDLEKADEYWQKRAAEAQKA
AQKAFNPDPDSVADNFNAAVGQEIVNSNNSRRSLRRYRGPCLATNPIDRCWRCDPNWDKN
RKKLAECPLGFGHQTIGGKRGPIYVVTDASDENLVDPKPGTLRHAVVQNGPRWIIFGRSM
IIRLSQELIISSNKTIDGRGFNVHIAFGAGLTLQFVHNIIIHGLHIHDIISKSGGMIRDA
FDHYGFRTQSDGDGISIFGGSHIWIDHVSMYNCQDGLIDAIMGSTAITISNSHFTHHNEV
MLFGASDSYKEDSIMQITLAFNHFGRGLVQRMPRCRFGFFHVVNNDYTHWLMYAIGGSQH
PTIVSQGNRFIAPPNPSAKQITKREYADESEWKNWSWRSEGDLMINGAYFVPAGDQTKGK
KSDFSRYDMIKFKPGAYVKRLTRFAGTLECQVGKPC
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgatcccttttagagccttgtttctttgttccttgctgtttgtggtcgtatattccgat
gctcctccggatggcgataagacacctgatgttgaagttgataagataaacgataaagga
atcgatcttgaaaaggctgatgaatattggcaaaaacgagctgctgaagctcaaaaggct
gctcaaaaggccttcaatcctgaccctgattccgttgctgataacttcaacgcagccgtt
ggccaggagatagtgaacagcaacaattcaaggaggagcttgaggagatacagaggtcca
tgcttggcgaccaaccccatagacagatgctggaggtgcgacccaaattgggacaagaat
cgaaaaaagctagccgaatgtccattagggttcggccaccaaaccatcggcggcaagaga
ggtcccatttacgtggtgacagacgcctccgatgaaaacctagtcgaccccaagcctgga
accctacgccacgcggttgtccaaaacggcccaagatggatcatattcgggcgcagcatg
atcatcaggctgtcccaagagctcataatctcaagcaacaagaccatcgacggccgcggc
ttcaatgtccacatagccttcggcgcagggctcactcttcaattcgtgcataatatcatc
atccatggccttcatatccatgacattatttccaaatctggtggaatgattagagatgca
tttgatcattatgggttccgaacacaaagcgatggcgatggtatttcaatctttggaggc
tctcacatttggatcgatcatgtttcaatgtacaattgccaagacgggttaattgatgcc
attatgggttccactgccattacaatttccaatagtcattttactcaccataacgaggtt
atgttatttggagccagtgatagctataaggaagattctataatgcaaataaccctagca
ttcaaccattttgggaggggattggtgcaaagaatgccaaggtgtagatttgggttcttc
catgtggttaataatgactatactcattggcttatgtatgccattgggggcagccagcac
cccaccattgttagccaagggaaccgtttcatagcccctccgaacccaagcgcgaaacag
ataacgaagagagagtatgccgatgagtccgaatggaagaattggtcatggcggtcggag
ggagatttgatgatcaacggggcgtactttgttccggcgggggatcaaaccaaggggaag
aagagcgatttctcaagatatgatatgattaaattcaagccaggagcctacgtgaaaagg
cttacacgcttcgctggtacacttgagtgtcaagtaggcaagccatgctaa
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