Cucurbita moschata (crookneck pumpkin): 111454645
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Entry
111454645 CDS
T05248
Name
(RefSeq) phytochrome A-like
KO
K12120
phytochrome A
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111454645
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
HisKA
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
111454645
NCBI-ProteinID:
XP_022951908
UniProt:
A0A6J1GJ14
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MSLSRPSPSTNTGGSSSSSSSQSRHTSRILTQTSIDAKLHSHFQHSASSFDYSSSIHLTA
NPPSTTTTPTTTAYLHHIQRSNLIQPFGCLIALHPTTHKLIAFSQNAPEFLTTVSHTVPT
ISDRPVLAFGTTLHSIFTPPTATALLKALAFPDVTLLNPILVHSKSSQKPFYAILHRVTG
SLIIDFEPVNPDEVPVTAAGALQSYKLAAKAITRLQALPSGSMARLCDTMVQEVFELTGY
DRVMAYKFHDDDHGEVFSEVTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMIVDCKAK
HVKVIQDPNLEFDLTLCGSTLRAPHSCHLQYMENMDSIASLVMAIVVNEEEHEEQFDHKN
KRKKLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELENQILEKNILRTQTLL
CDMLMRDAPLGIVSRSPNIMDLVKSDGAALLYNDKVWRLGMTPNDFELHDIASWILEYHV
DSTGLSTDSLYDAGYHGAVSLGDGVCGMAAVRLGCNDMIFWFRSHAASEIRWGGAKHEAG
EKDDGRRMHPRSSFKAFLEVVKTRSLPWKDFEMDAIHSLQLILRNTYKDKEINKSSIQST
LSDLKIDGRQEIESVTCEMVRLIETASVPILAVDVDGLVNGWNSKIAELTGICVDKAIGK
HLLTLVEDSSLETVKKMLFLALQGQEEKNVQFEIKTQGSHMESSSISLIVNACASKDLCE
NVVGVCFVAQDITHEKKVMDKFTKLQGDYKAIVQNPNPLIPPIFGVDEFGWCTEWNLAMA
NLSGWSREEVLNKMLLGEVFGSCCHVKNQEAFVNLGIVLNNAMSGQDSDKISFGFFARDG
MFVECLLCVNKIMDRDGEVIGVFCFLQLASQELQQALNVQKLCERTALKRLKALGYIKRQ
IQNPLCGIVFSSKMLERSQLGDEQNQLLLNSGDCQRQIFKVLHDSDDLDKIIEGFIDLEM
VEFSLHEALVVSISQVMMKSKGKGIQIVNEVAEEIMSETLYGDSLRLQQVMADFLLISVN
YAPTGSSIMVSTNMTKDESGKSVNLVHVEFRITYVGGGMPESLLNEMFGNDEEASEEGFS
LLVSRKLVKLMNGEVRYVREAANSTFIITLQLAAAHK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgagtagacccagcccgtccacaaacacaggaggatcctcctcctcctcctct
tcacaatcaagacacacttcaagaattctcactcaaacctccatagatgcaaagctccac
tcccacttccaacactccgcttcttccttcgactactcttcttcaatccatctcacagcc
aacccaccatcaaccaccaccacccccaccaccaccgcatacctccaccacatccaacgc
tccaacctcatccaacccttcggctgcctcatagccctccacccaaccacccacaaactc
atcgccttcagccaaaacgcccctgaattcctcaccacagtctcccacaccgtccccacc
atctccgaccgccctgtcctcgcctttggcaccaccctccattccatcttcacccctccc
accgccacagccctcctcaaagctctagcctttcccgacgtcactctcctcaaccccatt
ctcgtccactccaaatcctcacaaaaacccttctacgccattctccaccgtgtcaccggt
agcctcatcatcgacttcgaacccgtcaaccccgacgaagtccccgtcaccgcagccggt
gctctccaatcatataaactcgcagccaaagccatcactcgcctccaagctctccctagt
ggaagcatggccaggctttgtgacaccatggttcaagaagtgtttgaactcacaggatat
gatcgagtcatggcatataaattccatgatgatgatcatggggaggtgttctctgaggtt
acaaagcctggacttgacccatatcttggattgcattatccagccactgacatcccacaa
gctgcaaggttcttattcatgaagaacaaggttagaatgattgtggactgcaaagccaag
catgtcaaggtgattcaagacccaaatcttgagtttgacttgacattatgtgggtcaaca
ttgagagctcctcatagttgccatttacaatatatggagaatatggattcaattgcatct
ttagttatggcaattgtggtgaatgaggaagaacatgaagaacaatttgatcataagaac
aagagaaaaaaattatggggtttggtggtttgtcataacacaactccaagatttgttccc
tttcctcttagatatgcatgtgaatttctagctcaagtttttgcaattcatgtcaacaaa
gaattggaattggagaatcaaattttggagaagaacatcttaagaactcaaacgcttttg
tgtgatatgttgatgcgtgatgcaccattagggattgtgtcaaggagccctaatataatg
gatcttgtgaagtcagatggggctgcattgttgtacaatgataaggtatggagattaggg
atgactcctaatgattttgagcttcatgatattgcttcatggattttggagtatcatgtg
gattcgactggattgagtacggatagcttgtacgatgcggggtatcatggcgcggtttct
ctaggagacggcgtgtgtgggatggcggcggtgaggctaggttgcaacgacatgattttt
tggttccgatcgcatgctgcatcggagattaggtggggcggggcaaagcatgaggcgggt
gagaaggatgatggaaggagaatgcatcctaggtcatctttcaaggcttttcttgaagtg
gttaagacaaggagtttgccttggaaggactttgaaatggatgctattcattctttgcag
cttatactaagaaacacttataaagataaagagattaataaaagttcaatacaatcaaca
cttagtgacctgaaaattgatgggaggcaagagattgaatcagtgacatgtgagatggtg
aggttgattgaaacggctagtgttccaattttggctgttgatgtggatgggcttgttaat
gggtggaactcaaaaattgcggaattgactggaatttgtgttgacaaggctattggcaag
catttgttgacactggtggaagattcttcgttggaaactgtgaagaagatgttgttcttg
gcattgcaaggccaagaggagaaaaacgtccaatttgagataaaaacacaaggctcacac
atggaatcaagctcaatcagcctaatagtaaatgcatgtgcaagcaaagacttgtgtgag
aacgttgtgggagtatgcttcgtagcacaagacatcacccatgaaaagaaagtgatggac
aagttcacaaaattacaaggcgattacaaagccatagtacaaaaccccaacccactaatc
cctccaatatttggggtagacgaattcggttggtgcactgagtggaacttagcaatggca
aatctaagtggatggtcaagagaagaagtgctgaacaagatgcttttgggggaagttttt
gggtcatgctgccatgtaaagaaccaagaagcctttgtgaatcttgggattgttttgaac
aatgccatgagtggccaagattctgataagatatcatttgggttctttgcaagagatggg
atgtttgtggaatgtcttctttgtgtgaataagataatggatagagatggggaagtgatt
ggggttttttgcttcttgcagcttgctagccaagagctgcaacaagctttgaatgttcaa
aagttgtgtgagagaacggctttgaaaaggttgaaggctttgggatatattaagaggcag
atccaaaatcctctttgtgggattgttttttcgagtaagatgttggagagatctcagttg
ggtgatgaacagaaccagcttttgcttaatagtggtgattgtcaaaggcagatctttaag
gttcttcatgattcggatgatcttgataagattattgaaggcttcattgatttagaaatg
gttgagttctcattacacgaagcattagtggtatcaattagtcaagtaatgatgaagagc
aaaggcaaaggtatccaaatagtaaacgaggtagcagaagagatcatgtccgaaacctta
tatggagacagtttgagacttcaacaagtaatggctgatttcttgttgatatcagtaaat
tacgcaccaacaggaagcagcattatggtttcaacaaatatgacaaaggatgaatcaggg
aagtcagtgaatcttgtgcatgtggagttcaggataacatatgtcggtggtggcatgcca
gaatcgttgttgaatgagatgtttgggaatgatgaggaggcgtctgaagaaggttttagc
cttctggtgagtagaaagttggtgaagttgatgaatggagaggtgagatatgtgagggaa
gcagccaattcaaccttcatcataactcttcagcttgctgcagctcataaatag
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