Cucurbita moschata (crookneck pumpkin): 111454846
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Entry
111454846 CDS
T05248
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 16-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111454846
03036 Chromosome and associated proteins [BR:
cmos03036
]
111454846
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111454846
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111454846
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
111454846
microRNA pathway
RISC loading complex
111454846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
111454846
NCBI-ProteinID:
XP_022952087
UniProt:
A0A6J1GJG1
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MINITNIQGKRSEASPLPLTPPVPPDTKPEKTMPPTYTIMSRRGVGSKGRRIPLLTNHFG
VSVNAPDLIFYQYSVSICYEDNRPVEGKEIGRKLMDKLYQTYSTELANKRFAYDGEKCLY
CVGPLPQNKLEFTVVLEGSYAKLETGRSGGSGSPNGIGKRSKCSFQSKTFKVELSFATKI
PMKSIFTALKGEEVDNGHSQDALRVLDIILRQQAANQGCLLVRQSFFHDDSRNFADVGGG
VTGVRGFHSSFRLAQDGLSLNMDVSTTMILKPGPVIDFLIANQNVREPRYIDWVKAKRML
KNLRVKASHRNMESKIIGLSEKPCNQQFFSMKLKNNGSADGQMVDVTVYEYFVRHCGIEL
TYSAYLPCLDVGKPKRPAXLPLELCSLVSLQRYTKALSLMQRASLVEKSRQKPQEKIKVL
TDALKNYQYDEDPVLAQCGLKIDRQPTQVEGRVLESPKLEVGKSDDCIPRNGRWNFNNKT
LLNPTRIDRWIVVNFSARCDXSYISRELINCGGNKGIHIERPITLIEEDQHSRRASPVDR
VENMFEQTVGKVSDAPSFILCVLPEKKNSNIYGPWKKKCLCDFGIVTQCISPTKINDQYI
TNVLLKINYKLGGINSLLAIEHAPCVPLIKDTPTLILGMDVSHGSPGRSDVPSIAAVVGS
RSWPLISRYRAAVRTQSPKVEMIDALYKPLEDGNDDGIIRELLLDFYRTSNGRKPTQIIV
FRDGVSESQFNQVLNIELDQIVKAYQHLGEVNVPKFTVIVGQKNHHTKFFQPGAPENVPP
GTVVDTKVVHPKNYDFYMCAHAGMIGTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYVYQR
STTALSIAAPICYAHLAASQMSQFINFEELSETSSERGTITSSGSLSIPELPRLHKDVNG
SMFFC
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgattaacattactaacatccaagggaaaagaagcgaagcttctcctttgcccctgacg
ccacctgtacctcctgatacaaagccagaaaaaacaatgcctcctacgtatacgatcatg
agtagacgtggtgtaggaagcaaagggagacgcattcctttgcttactaaccacttcggt
gtatctgttaatgctccagatttaattttctatcaatacagtgtttcaatttgctatgag
gataacaggcctgttgaagggaaggaaattgggcggaaactgatggataaactctatcaa
acttattctactgaacttgctaataaaaggtttgcgtatgatggagaaaaatgtctttac
tgcgtgggtcctctgccacaaaacaagcttgagttcactgtggtgctagagggatcatat
gcaaaactagaaactggtagatctgggggcagtgggagtccgaatgggattggaaagagg
tcaaagtgtagttttcagtcgaagacttttaaggttgagctaagctttgctacaaaaatt
ccaatgaaatccatttttactgccctcaagggagaagaggtggataatggccacagtcag
gatgcattgagagtgcttgacattatcctgaggcagcaagcagcaaaccagggatgtctt
ttggtaaggcagtcattctttcatgatgactcaaggaactttgctgatgttggaggaggg
gtaacaggagtacgaggatttcattctagcttccggttggctcaggatggattatctttg
aatatggatgtttctaccacaatgatcctgaagcctggaccagtgattgacttcctaata
gccaatcagaatgtacgggaaccacgttatattgattgggtgaaggcaaaaagaatgtta
aagaatttgagggtcaaggctagccatcggaacatggaatctaaaatcattggtttaagt
gaaaaaccttgtaaccaacaatttttttccatgaaactgaagaataatggcagtgctgat
gggcagatggttgatgttactgtttatgaatattttgtcagacattgtggcattgaattg
acatattctgcttatttgccatgtctagatgttgggaaacctaaacggccagcttagttg
cctttagagttgtgctcacttgtttcacttcaacgctacacaaaagctttgtctttaatg
caaagggcatctttggtagaaaaatcaaggcagaagcctcaagaaaaaataaaagttctc
actgatgctttgaaaaattatcaatatgatgaggatccagtgctagctcagtgtgggctg
aaaatagatagacaacccacacaggttgagggtcgtgtacttgaatcaccaaagttggaa
gttggtaaaagtgatgattgtattccacgtaatggacggtggaactttaataacaagaca
cttctgaatcccactcgcattgaccgttggattgtggtcaatttctcagcacgctgtgat
ntaagctacatatcacgtgaactgataaattgtggaggaaataaaggcattcatattgaa
agaccaattaccttgatcgaggaagaccagcattctagaagggccagccctgttgacagg
gttgagaatatgtttgaacagacggtgggaaaggtgtcagatgcaccatcttttattctt
tgtgttcttccagaaaagaaaaattcgaatatttatggaccttggaagaagaagtgccta
tgcgactttgggattgttacacagtgcatttccccaactaaaattaatgatcagtacata
actaatgtacttcttaagattaattataagctgggaggtataaactcattgctggctatt
gagcatgcaccttgtgttccgttaataaaagatactccaacgttgatcttgggaatggat
gtgtctcatgggtctcctggacgatcagacgttccatcaattgctgcagttgttggatcc
agatcctggcctttgatatcaaggtatagagcagctgtacggacccagtcgcctaaggtg
gaaatgattgatgctctatataagcctctggaggatggcaatgatgatggtatcattagg
gaattgcttttagatttctatagaactagcaacggccgcaagccaactcagatcattgtc
tttagggacggagttagtgaatcccaatttaatcaagttttgaacattgagttggatcaa
atagtcaaggcttaccaacatcttggagaggtcaatgttccaaagttcacggttattgta
gggcaaaaaaatcaccacacaaaattttttcaacctggtgcccctgaaaatgttccacct
ggaacggttgttgatacaaaagttgtacatccaaaaaattacgacttctacatgtgtgct
catgcgggaatgattggcacgtcaaggccggcacactaccatgtcctgctcgatgaaata
ggtttttctcctgacgatcttcaaaatcttattcattcactatcatatgtgtatcaaagg
agtacgactgcactttcaattgctgcgccaatatgttatgcgcatcttgccgcgtcacag
atgagccagtttattaactttgaggagctgtctgaaacctcttctgaacgaggaaccatt
acttcatcggggagtctttcaattccagaacttccacggttgcacaaagatgttaatggt
tctatgtttttctgctga
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