Cucurbita moschata (crookneck pumpkin): 111454970
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Entry
111454970 CDS
T05248
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111454970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmos04131
]
111454970
03051 Proteasome [BR:
cmos03051
]
111454970
Membrane trafficking [BR:
cmos04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
111454970
Proteasome [BR:
cmos03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111454970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
XPC-binding
UBA_NBR1_C
Ubiquitin_2
Rad60-SLD_2
UBA_HOIP
Motif
Other DBs
NCBI-GeneID:
111454970
NCBI-ProteinID:
XP_022952232
UniProt:
A0A6J1GJU4
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MGADGDSSEHRVHGDGEEGGGSVTVNIRCSNGSKFSVRTSLDSLVGTFKSILAQNCDVPA
DQQRLIYKGRILKDDQTLVSYGLQADHTIHMVRGFAQASAPPSAPASNVNSRSSDTATGV
TRGVGSTESGAFGNAGLGASLFPGLGFNPLGGGGAGLPEFEQVQQQLTQNPNMMREIMNM
PAIQNLMNNPDLMRTLITSNPQMRDIIDRNPELAHILNDPGILRQTLEAARNPELMREMM
RNTDRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGNAGNDSSANPFAALLSNQGGA
PARNESNNSSTTGSETTGNAAPNTNPLPNPWGGTQTTTTRPTPAGDARAPGIGGLGGAGR
TNVDPLAGVVPDAAQMNQFLQNPAISQMMQSLLSNPQYMNQILNLNPQLRSMVDMNPQLR
EMMQNPEFVRQLTNPEMIQQMLSIQQSLLSTLNRQPSAQDSAQSGAAATGVPSAAGLEML
MNLFGGLGAGGLAVSNNPNVPPEELYATQLSQLQEMGFFDTQENIRALRATSGNVHAAVE
RLLGNLGQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgacggtgattccagcgagcaccgggttcatggtgacggtgaagaaggggga
ggtagtgttacagttaatattcgatgttctaatggttcgaaattttcggtgaggacgagt
cttgattccttggttgggacatttaaatcaattcttgctcagaattgtgacgttccagct
gatcagcaacgcttgatctacaagggtcgcatcttaaaggacgatcaaaccttagtcagt
tatggtttacaggcagatcacactattcacatggttcgaggttttgcccaagcttcagca
ccaccttctgcacctgcttccaatgttaatagtagaagttctgacactgctactggcgtt
acaagaggtgttggttctactgagagtggtgcttttggaaatgctggccttggtgcatca
ttatttcctggactgggttttaatcctcttggtggcggtggagctggacttcctgagttc
gagcaagtgcaacaacagttgactcaaaacccgaacatgatgagggaaataatgaacatg
cctgcaattcagaacttgatgaataaccctgacttgatgcggaccttaattacgagcaat
cctcagatgcgggatattattgacaggaacccagagcttgctcacattctcaatgaccct
ggtatccttcgacagacgttagaggctgcaaggaatcctgaactcatgagagagatgatg
agaaacactgaccgagctatgagtaacattgaatcttctcccgagggatttaacatgctg
aggcggatgtatgaaaatgttcaggagccatttctaaatgcaacaacgatggctggaaat
gctgggaatgattcaagtgcaaacccatttgcagctctcttgtccaaccaagggggtgca
ccagcgaggaacgagtctaataattcttcaactacaggatcagaaacaacaggaaatgct
gctccaaatacaaatccacttcctaatccctggggaggaactcagacaacaaccacacgg
cctactccagctggtgatgcaagggctcctggtatcggaggattaggaggagctggccgt
acaaatgtggatcctcttgctggtgttgtgccagacgcggctcagatgaatcagtttctg
caaaatccagctatttcacagatgatgcaaagcctgctctccaatcctcagtatatgaac
cagatcctcaatctgaacccacagctacggagcatggtcgatatgaatcctcaattaaga
gaaatgatgcaaaatccggagtttgttcgccaattaactaatcctgagatgattcagcaa
atgctatcaattcagcagtcactcctctctaccttaaatcgacagccatcagctcaagac
tctgctcaatcaggtgctgctgctacaggtgttcctagcgctgctggattggagatgtta
atgaacctgtttggtgggctcggtgctggcgggttggctgtttcgaacaatcccaacgtg
cccccagaagaactatacgcaactcaactttcacagctccaagagatgggcttcttcgac
acccaagagaacatcagagctctacgcgctacttccgggaacgttcatgctgctgtcgaa
cgactgctgggaaatctcgggcagtaa
DBGET
integrated database retrieval system
