Cucurbita moschata (crookneck pumpkin): 111454972
Help
Entry
111454972 CDS
T05248
Name
(RefSeq) protein SHORTAGE IN CHIASMATA 1 isoform X1
KO
K28108
shortage in chiasmata 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111454972
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Meiosis-specific proteins
Others
111454972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
111454972
NCBI-ProteinID:
XP_022952235
UniProt:
A0A6J1GL72
LinkDB
All DBs
Position
Unknown
AA seq
1671 aa
AA seq
DB search
MRTRFLNIDFFAPGNESFHRLPVPHLVSNPLSTVGDLLHFDFLPEISLGIDSLSIDSAIS
RFFDDVLPRRIVDDDVYRDAGCQSSGFHGSAERIFSSESVGTRLREEEAKGTYEDNMEGS
WKNFGSETSEMEFVKKDIGTEIRNRNFSNDMIQFETPQLDTFLENAFLFEKEEVQILTAM
PEVEFDLETLNQGLLKYPSEVKESIYDVEIIPSEYLLDQESCLFEDDFAQDQKLSHQFTF
PFLEVDEMVLETLAFLSLQDELFFILESTESAHMIHDDNLLVNNEEYLSSMRCDAEEFLS
DHFLRPCGVSELASPDISGGSSDLMSMMETLEIAVSSEVQTKSSCDLSVEPAIFEEFQLL
DTYSNQHFGAIFDLEVSAMSEITDCTSIENTNFKSFNELIVCHELVLVDDTFKSLPVPIL
SSQGSEKLLNAFIEDVLANLNKQSLSASDGIYLDWHLLDESSYSSGLYSSYQNMLEEINL
KPVEFDREPCENDGIFYRYVFSDDALVRERTEDKGELKESFPEGIPMLSGQTIDVASSIL
LNERCQQKERQGLAAVGNSEKALSSWKSKSESNDLKFFLNSQKPVGVRKSESVFSEIDTN
TTLPKVPRDGILTNKPSMSSADDSLKQLNVAVHQVCLSDNILHLINNSEKTYLAILQNET
ELRKKYLPYVAEDYLLMLSLPKQKLIDCIKKIYLQGTNTYWEEKIMTLATLYATKQIVWY
LCFYGIHPAHLYLKKLCQSSECLKSRLGFLVSSIEEAGKMVGREITISHPALTTIQEILC
SRTSTSSLKVLVVANQIFWWSLEKLLGSLGISFAEINYGSLTVEQVSNANAMVDDLASNC
LLVSQEYISGSFPFNKFSIVLEYGGLNGSSQISAYFSNLIDMPHLHFIMLELDKCGNCKA
FCEGVDFPQHNELTIEEKSLVENQTMMLEKLLNFLPVEEKYILASPKKTIEAENRRVPLR
APVEPVSDKSQYTDLVSFPEAIIIVNTQKFEKEMIVCRRSSYRRILALEKEGVQVVERDL
CLPVDLIIAPGICLFWYDCTNIDRKGSTSNEASLCLNLCIENIATDVLTSLSFAFRGCVL
ISFQVFEGEISSLSIVMESSDGLYAAAASLEIDFQLFCSYSSELTDEIILGCIENVSKLM
TRRIYPKMSESETLAESFLTSFPSINPLIAHGILSSESLLADFLEWPHERRLHAIRKYSI
PDDCISLFSALCKYGEREDSKSVMTDCSSSLSSGADSEKCHFNGNSERKRRNFTGGTQCI
EKNTDCLYSNTLNPFTAGTAETLVASKSFGSQLFEDPEIFCDLKGLSSSVNNFFDQNHNL
ASFDATVSMDPTRVCKPRDCWISTAPEISDEIRRHCSPFVQNQGLDRSKKKIHSFHNMNK
SENHHEELIAEVDNLIDNPVLKDHFATMAPMNFLPSMLENETDSSRKSKIQRRLSYGQSD
HPFCAVDVGNNSSSDFWSSINLHGQSSRGLDNQFPDPSFEPSIMPLRYKDDHLDEGLTQN
HLRDSKVSFSLSEKDTSHSDVTPLSVALRSKHLQESSPWTMEFLNRIREKSRNRQHSVPR
GSSSPFPENLGNVKKTVKRRSPSILEFFKYQGGSTLRKKPEQKRHKPSTQSSNSSKNVLV
ATRELSSGTPIDKRSRQTLSYATDGNGSQTKLVWSNDNYGLGKNSQKLGNK
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcggttcctcaacattgattttttcgctccaggaaacgaatcctttcaccgc
cttcctgtccctcacctcgtttctaatccactttccactgtcggcgaccttctccacttc
gattttctccctgaaatctctcttggaatcgatagcttatcaatcgattctgctatctcc
aggttctttgacgacgttcttccgcgtagaatcgtggatgatgatgtttatcgcgatgct
ggttgtcagtcttctggatttcatggttccgcggagaggattttctcttcggaaagtgtt
ggaactcgacttcgggaggaagaagctaagggtacttatgaagataatatggaggggagt
tggaagaattttggatctgaaacttcagagatggaattcgtaaaaaaggatattgggact
gaaatacggaatagaaacttttcaaatgatatgatccaatttgaaacacctcagcttgat
acgttcttggaaaatgccttcttgtttgagaaggaggaggtacaaattctgacggcaatg
ccagaggttgaatttgatcttgagacccttaatcaagggcttcttaaatacccttccgag
gtcaaagaatcaatttatgatgttgaaatcattccctcagaatatctcttggaccaagaa
tcttgcttgtttgaagatgattttgctcaggaccagaagctatcgcatcaattcaccttt
ccctttttagaagtagacgagatggttcttgaaactttggcattcttgtcgttgcaggat
gaacttttctttattcttgagagtactgaatcagctcacatgatacatgatgataattta
cttgtcaataatgaagaatacttgtcctccatgaggtgtgatgctgaagagtttctttca
gatcattttttgaggccatgtggtgtttctgagttggcatcccctgacatatctggagga
tcgtctgacttaatgagcatgatggaaactttggagattgcagtgagctctgaagttcaa
acaaaatcaagttgtgatttgtctgtagaaccagctatttttgaagaattccagctgctg
gacacatactcaaatcaacattttggagccatctttgatttggaagtatcggccatgtca
gaaattactgactgtacatccattgaaaacacgaatttcaagagtttcaatgaattgatt
gtttgtcatgaacttgtcctcgtagatgacacgttcaaatcattacctgtgcctatacta
tctagtcagggatctgaaaaactcctgaatgccttcatagaggatgttctagccaaccta
aataaacaatcattatcagcttccgatggcatatatttggattggcatctattggatgaa
agtagctacagctctggactttattcttcgtatcagaatatgttggaagaaattaatttg
aaacccgtagaatttgaccgggaaccttgtgaaaatgatggtatattttatagatacgtt
ttctcagatgatgctttagtaagggaaagaacagaagacaagggtgaactaaaggagtct
tttcctgagggtattccaatgctttctggtcaaactattgacgttgcttcaagcatatta
ttgaatgaaagatgtcaacaaaaagaaaggcaaggtcttgcagctgttggaaattccgag
aaggctttatcgtcatggaaatcaaaatcagagtccaacgatctcaagtttttcttgaat
tctcaaaaacctgttggcgtgagaaagagtgaatctgtatttagtgaaattgacaccaat
actactctccccaaggttccacgtgatggaatattgactaacaaaccttctatgtccagt
gctgatgatagtctgaagcaattgaatgttgcagtacatcaagtttgtctgtctgataac
attctacatctcattaataactctgagaaaacttatctcgctatcttgcagaatgagaca
gagctgaggaagaaatatcttccttatgtagctgaagattatttattaatgctcagcctt
ccgaaacagaagttgatagactgtattaagaaaatatatctgcaagggaccaatacttac
tgggaagaaaagataatgacattagccacgttatatgccactaaacagatagtttggtat
ttgtgtttctatggtatccacccagctcatctatatctaaagaagttatgtcagagctcg
gagtgcttaaaatcgaggttgggtttcttggtgtcatcgattgaggaagcaggaaaaatg
gttggcagagaaattaccatatcgcatccggcacttactactatccaggaaatcttatgc
tcaaggacttctaccagtagtctcaaagttctggttgtagccaaccaaattttctggtgg
tcattggaaaaattgctcgggtccttggggatatcctttgcagagataaattatgggagt
cttacagttgagcaagtatctaacgcaaacgctatggttgatgaccttgcttccaattgt
ttattggtatcccaagagtacatatctgggagttttccattcaataaatttagcattgtc
ttggaatatggaggtctgaatggttcttctcagatctccgcttacttttcaaatttaatc
gacatgcctcatctacacttcataatgttggaactggataagtgtggcaattgcaaagca
ttttgtgaaggtgttgattttcctcaacataatgaactgacaatcgaagagaagtctttg
gtggagaatcagaccatgatgttggagaaattgttgaactttttacctgttgaggaaaag
tatatattggcctctccaaagaaaacaatagaagcagaaaatcgcagagtgcctctgcga
gcaccagtagaaccagtctcagataaatctcaatatactgaccttgtgtcctttcctgag
gcaattattattgtgaacactcagaaatttgaaaaggaaatgattgtatgtagaagaagt
tcctatcgaagaattcttgcattggagaaagaaggagtgcaggttgtggaacgagatctg
tgtttgcctgtggatctaataattgctcctggaatttgcttattttggtatgactgcaca
aatattgacaggaaaggcagtacttcaaatgaagcttctttgtgcttgaatttatgcata
gagaatattgcaacagatgttttgacctctctaagtttcgcttttcgtggttgcgtcctg
atttcttttcaggtcttcgaaggagaaatcagttccctttccatcgtaatggaatcatca
gatggactttatgctgcagcagcaagtttagaaattgattttcagctcttctgttcctat
tcatctgagttgacggatgaaattatcctaggctgcattgaaaatgtttctaagttgatg
accaggcgcatataccccaagatgtctgaatcagaaactcttgctgaatcatttcttacg
agtttcccttcaattaatcctttgatagctcacgggatactttcttcagaaagccttctt
gctgactttctagagtggccacatgagcgcaggctccatgcaattagaaaatatagtatt
cccgatgactgtatctctctatttagtgctctgtgcaaatatggtgagcgggaggattca
aaatctgtgatgacagactgctcctcttcgctatcttctggtgctgattcagaaaagtgt
cactttaatggtaattctgaaaggaagagaagaaacttcactggtggtacccaatgcatt
gagaaaaatacggattgcttgtattccaatacgctgaatccgtttactgctggcactgca
gaaactttagtagcatccaagtcatttggttctcaactgtttgaagatcccgaaatattt
tgtgatctcaaaggtttatcttcatctgtaaataatttctttgatcaaaaccataatcta
gcgtcttttgatgcaactgtatcgatggatcctaccagggtctgcaagccacgtgattgt
tggatctccacagctcctgaaatatccgatgagattagaagacattgttcaccatttgtc
caaaatcagggtttagaccgaagtaaaaagaaaatacacagctttcataatatgaataag
tctgagaatcaccatgaggagcttatagctgaagtagacaacttgattgataaccctgta
ttaaaagatcactttgcaactatggctcctatgaatttcttgccttcgatgcttgagaat
gaaacagattcatcaagaaagtctaaaattcaaagaagattgtcttatggacaaagcgat
caccctttctgtgcagttgatgttgggaacaactcgagttcagatttttggagttctatc
aatttgcatggacagagttcacgaggattggacaatcagtttccagatcctagtttcgaa
cccagtattatgcctcttaggtacaaggatgatcatttagatgagggtttaacacaaaat
catttaagagattcaaaagtatcgttttcactttcagagaaggacacatcacattctgat
gtaaccccattgtccgttgctctccgttcaaaacatcttcaagaaagttcaccttggact
atggaatttcttaaccgaattagggaaaagagcagaaatcgtcagcattcggttccacgt
ggctcatcttcaccttttcctgagaatttgggtaatgtaaaaaaaactgttaaaagaaga
agtccctccattcttgaatttttcaagtaccaagggggaagcactctgcggaagaaaccg
gaacaaaagagacacaaaccatcaacacaatcatcaaactcatccaagaatgtcttagtt
gcaactcgtgaactttcttcagggacgcctattgataaaagatcaagacagactttatct
tatgcaactgatggcaatgggagccaaactaagctggtctggagcaatgacaattatggt
ttaggaaaaaactcacagaaacttggtaataaatga
DBGET
integrated database retrieval system
