Cucurbita moschata (crookneck pumpkin): 111454994
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Entry
111454994 CDS
T05248
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111454994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111454994
03036 Chromosome and associated proteins [BR:
cmos03036
]
111454994
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111454994
Coactivators
SAGA/TFTC/STAGA complex
111454994
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111454994
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
Motif
Other DBs
NCBI-GeneID:
111454994
NCBI-ProteinID:
XP_022952261
UniProt:
A0A6J1GJW9
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MDPSIMKLLEDDEDETMHSGAAVEAFQAALNRDIEGDVPAVSQAPESDAAFPRGSNGPSN
LSLQASQNEKTESHAQQDQNFRPKQEQHSSLMELERCSSLPENQQQHNAAPLQASKNQPQ
ADREQGDTEQVSAQFSQTAGLQGSEKAPILVNDSNRMQNRDNESQYLKLQKMSNQQTMVS
EQANNPLNRSKQVPFASLMPVLMPQLDKDRAMQLQTLFNRLKRNEMNKDDFIRLMRGVVG
DQMLRLAVCQVQAQPPPSVRQLSPRMPSMGPGAPNFSDPRPFSQLHQKGMNSPAVQSYIP
SSASQGRSSSGYPAMDKNMQSLREVEQRTDGNANQLTSSSSGTIQERERSSIPVPGLEKQ
QLHFQQKSFPMYGNSGNYHPYTGSNINTSSLSLKPQPHEGQAKQISQQAPNFDRQVTIND
PKRVQGGNVSHLRNNLTSQPSPWKSSTSKEQNTGPLSSMSYIKQEPSDQVSEQNKTQHSN
LQGLSSIPSMQAEQVNTTPGIAKDPFEKQTSKVAFPTSNNVMPQSSTNAANPISSDANSL
HESSAVLSSQVPSATTPGMQNRAPQKKGAVGQKKPLEALGSSPPLSSKKQKVSGAFSDQS
IEQLNDVTAVSGVNIREEEEQLFSSAKEDSRASEASRKVVQEEEERLLLQKAPLQKKLME
IMAKYGLKSMSNDVEKCLSLSVEERLRGIISNLIRLSKQRVDTEKPRHRTHITSDVRQQI
MLVNQKAREEWEKKQAEEEKLRKLNDPEDGSDIAGDKDKDEGRMKSVKVNKEEDDKMRTT
AANVAARAAVGGDDMLSKWQLMAEQARQKREGGMDSASGSQSGKDTVRKSSSAAGRHGKD
NQEGDRKGTSKKFGRNQMSASQTRVARSISVKDVIAVLQREPQMSRSTTIYRLFNKVRSE
ATGE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggacccctctattatgaagcttctggaggatgacgaggatgaaacaatgcattcgggt
gcagctgtggaggcttttcaggctgccttgaatagagacatagaaggtgatgttccggct
gtttcccaggctcctgagtcagatgcagctttccctcgagggagcaatggtccatctaac
ctctcgttacaagctagtcaaaacgaaaagactgaatctcatgcacaacaagatcaaaat
tttcgtccgaagcaagaacaacattcatctctgatggaactagagcgatgttcatcatta
cctgaaaatcagcagcaacataatgctgctcccctccaagcttcaaagaatcagccccaa
gcagatcgtgaacaaggggacacagagcaagtttctgctcagttttctcaaacagcaggg
ctgcaaggttctgaaaaagctccaatccttgtgaatgattcaaacagaatgcagaatcgg
gacaatgaatctcaatacctgaagttacaaaagatgagtaatcagcagacaatggtctca
gaacaggcaaataacccattaaatcgtagtaaacaggtaccctttgcctcgttgatgcct
gtattgatgcctcagcttgataaagacagagccatgcagcttcagactttatttaacaga
ttgaagaggaatgaaatgaacaaagatgattttatacgtctcatgaggggtgttgtgggt
gatcagatgctcagattagcagtttgtcaagtacaagcacagcctccaccttcagtcagg
caactttctcctagaatgccatctatgggccctggtgcaccaaatttctctgacccacga
ccattttcacaacttcatcagaaaggcatgaattctcctgctgttcaatcatatatcccc
tcttcagcatcccaagggcggagtagttcaggctatcctgccatggacaaaaatatgcaa
tctctacgagaagtagaacagcgaacagatggtaatgcaaatcaattgacttcatccagt
tcaggcaccatccaggaaagggaacgctcctcaattcctgttccaggactcgagaagcag
cagctacactttcaacagaaatctttccccatgtatggaaacagtggtaattatcacccg
tatactgggtcaaatataaatacctcttcgttatctcttaaaccccaaccccatgagggt
caagcgaagcaaatttcccagcaggctcccaattttgataggcaagttactataaatgat
ccgaagcgagtccagggtggaaatgtttcacacttacgtaataacttaacttcacagcca
agtccctggaagtcttcaacaagtaaagagcagaacacaggccctctatcttcaatgagt
tacattaaacaagaaccttctgatcaggtttctgagcagaacaaaacccaacattcaaat
ttgcagggattgtcttctattcctagcatgcaggctgaacaagttaacacaacccctgga
attgcgaaggacccttttgaaaagcaaacttctaaagtagcttttcctacatcaaacaat
gttatgcctcaatcatcaaccaacgcagcaaatccaatttcttctgatgcaaattctcta
cacgagtctagtgctgtgttaagctctcaggttccatctgcaactactcctggaatgcaa
aatagggcacctcaaaaaaaaggtgccgtgggccaaaagaagcctcttgaagcacttggc
tcttcaccacccttatcaagtaagaagcaaaaggtatctggggctttttcggatcaaagc
attgaacaacttaacgatgtcactgcagtcagtggagttaatattcgggaagaagaagaa
caactattttctagtgcaaaggaggatagtcgagcttctgaagcatcacggaaggttgta
caagaagaagaagagaggctgctattgcagaaggccccattgcagaaaaagctgatggaa
atcatggctaaatatggtttaaagagcatgagcaatgacgttgagaaatgtctctcactg
agtgtggaggaaagattacgtgggattattagtaatctaatcaggctgtcaaagcagcga
gtggacactgagaaaccaaggcaccgaacgcatattacttcagatgttcgacaacaaatt
atgttagtaaaccaaaaggccagagaagaatgggagaagaaacaggctgaagaagaaaaa
ctccgtaagcttaatgatcctgaggatggttcagacattgctggtgacaaggacaaagat
gaaggtcgaatgaaatcagttaaggtaaacaaagaggaggacgataaaatgcggacaaca
gcagcaaatgttgctgcccgtgctgctgttggaggagatgacatgctatcaaaatggcaa
cttatggctgagcaggcgcgacagaaacgtgaaggtggaatggattctgcttctggttct
cagtcggggaaagatactgtccgtaagtcttcatcagcagcaggaagacatggaaaggac
aaccaagaaggcgataggaaaggaacttccaaaaaatttggaaggaaccaaatgagtgca
agtcaaactagggtggctcgtagtatttctgttaaagatgtcatcgccgtgctgcaaaga
gaaccccagatgtccagatccaccacaatatatcgtttgttcaacaaagttcgttccgaa
gccaccggcgaatag
DBGET
integrated database retrieval system
