Cucurbita moschata (crookneck pumpkin): 111455143
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Entry
111455143 CDS
T05248
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03082
ATP-dependent chromatin remodeling
cmos03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111455143
03083 Polycomb repressive complex
111455143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmos03036
]
111455143
Chromosome and associated proteins [BR:
cmos03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111455143
Histone modification proteins
HAT complexes
HATB complex
111455143
HDAC complexes
Sin3A-HDAC complex
111455143
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111455143
PRC2.2
111455143
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111455143
Heterochromatin formation proteins
Other heterochromatin formation proteins
111455143
Chromatin remodeling factors
NuRD complex
111455143
NuRF complex
111455143
NuRF complex (fruit fly)
111455143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
111455143
NCBI-ProteinID:
XP_022952461
UniProt:
A0A6J1GKA6
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MAEEQAGGVDEVVEEFAIWKKNSPYLYDLLISHSLEWPSLTVDWVQSAPFPHQANPSLAV
HKLVLGTHTSEDVPNYLMVADCILPVKASETRIDISEENPIMPKIEITQKIRVEGEVNRA
RCMPQNPQIVGAKTSGCEVYVFNCAKQGAKAQGDECDPDLRLRGHDKEGYGLSWSPFKEG
YLLSGSNDQKICLWDVSSMADKNVLDAMHVYEAHESVVGDVSWHLKNENLFGSVGDDCLL
VIWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWIVATASSDTTVGLFDLRKLAEPLHVLSS
HAEGVFQVEWDPNHETVLASSGDDRRLIVWDLNSIGSEQDGEAEDGPPELLFSHGGHKAK
ISDFSWNTHEPWVISSVAEDNSVQVWQMAKSIYR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaacaagctggcggtgtcgatgaggtggtggaggaattcgccatctggaag
aagaactctccctatctgtatgatcttctcatttcccactcactggaatggccatctctc
accgtcgattgggttcaatcggcaccatttcctcaccaggccaacccatctcttgccgtc
cacaagcttgtcctcggaacccacacatcggaggatgtccccaattacctcatggtggcc
gattgtattttaccggtcaaagcatccgaaactagaatcgacattagtgaggaaaatccc
attatgccaaagatagagataacccagaagatacgtgttgaaggggaggtgaacagagcg
cggtgcatgccgcagaacccacaaattgttggtgcaaaaacgagtggatgtgaggtgtat
gtttttaattgtgctaaacaaggggcaaaggctcagggagatgagtgcgaccctgatttg
agattgaggggtcatgataaggagggttatgggttatcttggagtccgtttaaggagggt
tacctcttaagtggctcaaatgatcagaaaatctgtttgtgggatgtgtcttccatggct
gacaagaatgtgcttgatgcaatgcacgtttatgaggctcatgaaagcgtggtcggggat
gtgtcatggcatttgaagaatgagaatttgtttggatctgtaggcgatgattgcttgttg
gtgatatgggatttgcgtacaaataaatcagtggattctgttcgagctcacgaggaggag
gtgaactatgtttctttcaatccttataacgaatggattgtagcaacggcctcctcagat
accacagtgggtctgtttgatctccgaaagctcgccgaaccactgcacgttcttagcagc
catgcggagggagtgtttcaggtggagtgggatccaaatcatgaaactgtgttggcatct
tctggtgacgatagaaggttaatagtgtgggatctaaacagcataggaagcgagcaagat
ggagaggctgaagatgggcctccagagctgttgttttcacatggaggtcacaaggctaaa
atatcagacttcagctggaacacccacgagccatgggtcatttcaagtgtggctgaagat
aactcagtacaggtctggcaaatggccaaaagtatctaccgatga
DBGET
integrated database retrieval system
