Cucurbita moschata (crookneck pumpkin): 111455213
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Entry
111455213 CDS
T05248
Name
(RefSeq) DDB1- and CUL4-associated factor 13-like
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmos03009
]
111455213
04121 Ubiquitin system [BR:
cmos04121
]
111455213
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
90S particles
Other 90S particles
111455213
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111455213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Sof1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
eIF2A
PROPPIN
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
VID27
Beta-prop_IP5PC_F
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
111455213
NCBI-ProteinID:
XP_022952562
UniProt:
A0A6J1GKR2
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MKVNVISRYTDEFTRERSQDLQRVFRNFDPSLRTQEKAVEYVRALNAAKMDRMFAKPFIG
AMDGHLDAVSCMTKNPNHLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASAD
GRILVSCGTDCTVRLWNVPIPTLNSYETSNNSSEPLAVYVWKNAFWAVDHQWDGNLFATA
GAQLDIWDHKRSQPVSSFEWGTDSVISVRFNPGEPNILATSASDRSIALYDLRMSSPARK
IIMRTKTNSICWNPREPMNFTAANEDGNCYSYDSRKLDKAKCVHRDHVSAVMDIDFSPSG
REFVTGSYDRTIRIFPYNGGHSREIYHTKRMQRVFCVRFSCDASYVISGSDDTNLRLWKA
KASEQLGVLLPREKRKHEYQEAVKNRYKHLPEVKRIVRHRHLPKPIFKAAALRRTIMDAE
RRKEERRKAHSARGSISTVPLSRRRIIKEVE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcaacgtaatatcccgctacactgatgaattcactcgagaacgaagccaagac
cttcagagggtatttcggaacttcgatcccagtctccgtacgcaagagaaggcggttgag
tatgtacgtgcacttaatgccgcgaagatggacaggatgtttgcaaaaccattcattgga
gcaatggatgggcatttagacgccgtttcatgtatgacaaagaatcctaatcacttgaaa
gggatattttctggttcgatggatggagatattcgcctctgggatatcgctaacaggcga
actgtttgtcagtttcctggacatcaaggtgctgttcgaggcttgactgcatcagctgat
ggacgcatcctggtatcatgtgggacagattgcactgtcaggttatggaatgtcccaatt
cccactctgaattcatatgagacttcgaataattcatctgagcctctagcagtttatgtc
tggaagaatgctttctgggctgttgatcatcagtgggatggaaatctttttgctacagct
ggtgcgcaattagatatctgggatcacaaaaggtctcaaccggtgagtagttttgagtgg
ggaacagactcagttatctctgtccgttttaatcctggagaacccaatatcctggcaaca
tcagctagtgatcgaagcattgcattgtatgatttgcgcatgtcatccccagctaggaaa
ataattatgaggacaaagacaaattctatttgttggaatccaagggagccaatgaacttc
actgctgcaaatgaagacggcaactgttatagctacgattctaggaaactagacaaagca
aaatgtgtgcatagagatcatgtatctgcagtaatggatattgatttttcaccaagtggt
cgagaatttgttactggctcatatgatagaacaataagaatttttccgtataatgggggt
cacagccgtgagatttatcataccaaaagaatgcaaagggttttctgcgtcaggttcagc
tgtgatgcaagttatgtgatatcagggagtgatgacaccaaccttcggctttggaaggct
aaagcatctgaacaattaggagttcttcttccgagggagaaaagaaagcatgaatatcaa
gaggctgttaagaatcgttataaacaccttcctgaggttaagcgtattgtgaggcatagg
catttaccaaaaccgatattcaaagctgctgctctccggcgcactattatggatgccgag
agaaggaaggaagagaggaggaaagctcacagcgctcgtgggagcatctcgactgtacca
ctcagcagaagaagaatcatcaaagaagttgagtaa
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