Cucurbita moschata (crookneck pumpkin): 111455214
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Entry
111455214 CDS
T05248
Name
(RefSeq) exopolygalacturonase clone GBGA483-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111455214
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
111455214
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pectate_lyase_4
NosD
Motif
Other DBs
NCBI-GeneID:
111455214
NCBI-ProteinID:
XP_022952563
UniProt:
A0A6J1GKY8
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MSSLTISTSSTFIIFFFLCLITNGLAADFHVKRYGAKANGNSDDSQAIMRAWKDACMSRK
ASKVVISGGRYVVNSMKFKGPCMAPIHIQMEGRLEAPLNIQHMKSDDNWIIFEYINALTI
SGKGIFDGRGSLAWKQNQCASSGKCDSLPISLRFYSLNNTIIRGITSTDSKFFHMNVHNC
RNMTLQNIIINAPGVSPNTDGIHIGGSSGVTISNAKIETGDDCVSIGDGSRQITVEKVTC
GPGHGISIGSLGKYKNEKPVSGVMVRNCTIKNTMFGVRIKTWPDSTQGIATHMHFDSIVM
KNVGTPILIDQQYCPYGKCRFKIPSRVAISDVGFRNIVGTSTTRVAVKLVCSRGYPCKNV
KLSNINLRYIGTNGTALSECSNVKPTISGRVMPPPCTRAFAI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcactaaccatctcaacatcatccacattcatcatcttcttctttctttgtctc
atcacaaatggcctagctgctgatttccatgtcaaaagatatggagcaaaagccaatggc
aactcagatgatagccaggcgattatgagggcttggaaggatgcttgcatgtcaagaaag
gcaagcaaagtagtgatatccggtgggagatatgtggtgaattcgatgaagtttaaaggg
ccatgcatggcgcccattcatattcaaatggagggcagactcgaagcgcccctcaatatt
caacacatgaaatctgacgacaattggatcatttttgagtacattaatgctttaacaata
tctggaaagggcatttttgatggccgaggatctcttgcttggaagcaaaatcaatgcgct
tcttctggcaaatgcgactctctccctattagcttgagattttacagcctcaacaacact
ataatccgaggcataacttcaacagacagcaagtttttccacatgaacgtgcacaactgc
aggaacatgacccttcaaaacatcatcatcaatgcccccggtgtaagtcccaacaccgac
gggatccatattggaggatcgagcggggtgactataagcaatgccaagatcgaaacgggt
gacgattgtgtctcaatcggcgacggaagccgacagataaccgtcgagaaggtgacatgc
ggtcctggccatgggattagcattggaagccttgggaagtacaagaatgagaaaccagta
tctggagtcatggtgagaaattgcacaatcaaaaacaccatgttcggagttagaatcaaa
acatggccagattctacgcaaggaattgccacccatatgcactttgatagcattgtgatg
aagaatgttggcactcctatcctaattgaccaacaatattgcccatacggaaagtgccga
ttcaagattccatctagagttgcaataagcgatgttggattcaggaacatcgtagggaca
tcgacaactcgagtggctgtaaagcttgtgtgcagccgagggtatccgtgcaagaacgtg
aagctatcaaacataaacttgagatacataggcaccaatggcacagccctatcagaatgt
tccaatgtgaagcctacaatatctggaagagtgatgccgccaccctgcactagggctttc
gcaatatga
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