Cucurbita moschata (crookneck pumpkin): 111455457
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Entry
111455457 CDS
T05248
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111455457
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111455457
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111455457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
111455457
NCBI-ProteinID:
XP_022952916
UniProt:
A0A6J1GLK1
LinkDB
All DBs
Position
Unknown
AA seq
2074 aa
AA seq
DB search
MAHLFISDEEFSRHSNDAAFIAEKADAFIQGLYSELETVRAQADAASITAEQTCSLLDQK
FLSLSAEFSDLQSQNAQLQTTLELRLSELAEVKSQTHQLNLLSIGKDGEIERLNTELSEL
HKSKRQLMELIEHKDLEIGEKDSTIKSYLDKIVNLSETAAQREARISEIDMELVRSRAEF
AHLSQEKELVERHNAWLNDELTAKVGSIIEMRRLHSDTEAEMSAKLRDVERQLDECSSTL
KWNKDSVKELEMKLTSAQEELCSSRKLAAENEERLCAEISTVNKLVELYKESSEEWSKKA
TELEGVIKALETHLNQVESDYKEKLVKGESERNRLEEVAADLKVKLEKCEAEIELSRKKN
ELTLCPISSFAPDVLINPKESSDVVDDYHKFEPRVPVGVSGTALAASLLRDGWSLAKMYA
KYQETVDALRHEQMGRKEAEAVLQRVLCELEDKAEVILEERAEHEGMIESYSLLNQKLQH
SISEQAILEKSVQELKAVLKRHERDYMLIQRENVDLSRQVTILLKECRDVQLRCGSAGHD
VLENLSTPTSFQINVESDADRVISEYLQLTFKDINGLVEQNVQLRSLVRKLSVQLQDTEL
GFKEKLEAELKSKTQEAASRVEAVLQKVEEQGQMIESLHASVAMYKRLYEEEQKRSLPHS
HSSGVALADFCRKELKFVSEDSQEDTKAALDQASKRVRSLEEELEKSRSEINLVRTERNK
FELESGFAKEKLASFMKEFEQQRVEMNGVLARNVEFSQLLVDYQGKLRKVSESLHNADEQ
SRKLSIEVSILKSEKELLSNAEKRAHDEIRNLSERLFRVQASLDTIRSVEEVHEEARVVE
RRKLEEHAKQLEREWAEAKKELQEERDNVRTLTLDREKTLKNAMSHVEDMGKELANALHA
TAAAEARAAVAEAKLFDLEKKISSSANQVIELDDRSGLKSHPSNQVGIDLHRTEAEIKKF
KEEAQACKEHMLQYKSIAQVNEEAVKQMECAHESFKIEAEKMKKSLEVELLQLRERVAEL
ENESILKSQEIASAARLKEEAIASSLADVRNLNEENAAKTSKILEMEIQISYLKEDLERE
QQKWRTAQANYERQVILQSETIQELTKTSQALASLQEEAAELRKLADAYKTENEELKAKW
EGGKVALEDFKNKADKAYNELNEQNKILHAKLEAFHIRLAEKDQKLAGVSSELNTEMVGD
SGMQSVVSYLRRTKEIAEVEISLLKKDKLRLQSQLESALKAVESAQASLNAERQSSKALL
LTEEEIKSLQLQVREMNLLRESNIQLREENKHNFEECQKLREEFRKAKSETENFESMLKM
REVEVEACKMEIESQKVEKVHLESRVSELLEKSKNIDYEDYNRVKDDVQRMQMELNEKDA
EIAKVKMLIIERQESISQLEQDLSSCRFELKEREKKLNDIQHIEANLRTDMEKQKKFFSQ
FKRKLEIVSKEKDELGKENQALLRQLEDIKQVNIVGKRSTGDSTGEQTIEEKDTKIQILE
KHLERLREELKREKEDSRTEKSRRLKIEKAIKDSYTIVEQEKSKILNDLEKHKGNLKQAS
DELEKLRQSKSNLSEDALPQPLSGIGLDDLASTYVLAAENFEKTVQSVLTDLGAQNATSE
VSLVTDALVQSSTGPDVPLQTPDVAVPVAPVTTNFPAKILEEREKKGQLSKAKVETRKAG
RKLVRPRLGKPGGSLGDIDMSTSELPNSESKRATSGKSETESESTTSAHQLARKRVATAS
ELHEHAVIPGESITEMAAPVMKKAKGSDTLADDVGGPSSTSLESLKTQSPLEEVPDVCEF
PHGSSEDAADVEKEVEIAGEKADRPKELSSDGSISHEEIHTDRMDENLDKQIVAVSDDGL
KDQAEPDNWHLTSEIGSEREEGEVAPEVMELEGANNVESIEIGDDHIEPVATPEASPSRV
DDDAMAVTDMEIGEINSPEIQNEEKNDEGDAADETSEILDKPTDSNQIDMESDQAVETTS
VATENVSSTPPEINDSKQGSPIVAKRSSPVGSSTSTTINLQERAKERAMLRQAGVVSSLD
RRPVRGLRGRGGRIERGGRGQRSGRGPPGESGRS
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atggcccacttattcatctccgacgaggagttctctcggcactccaacgacgctgctttt
attgccgagaaggccgatgccttcatccaaggtctctatagcgagctcgagaccgtcaga
gcccaagctgatgctgcttcaatcactgcggagcagacttgttctcttcttgatcagaag
ttcctctctctttccgctgagttctctgacctccagtctcaaaatgcacaacttcaaacg
accctcgaacttcgactctccgagcttgccgaagtcaagtcccaaacgcatcagcttaat
ctactttccattgggaaggatggggagatagagaggttaaatacagagttatctgagttg
cataaatcaaaaaggcagttgatggagcttattgagcacaaggacttggaaattggtgaa
aaagattccactataaagagttatcttgataagattgtcaatttgtctgagacagctgct
caaagagaagcccgtatcagtgagatcgacatggagttggtgcgctcccgggctgaattc
gctcatctttcacaggagaaagaacttgttgagaggcataatgcgtggcttaatgatgag
ttaactgctaaagtaggcagtatcatagagatgcgtaggcttcattctgatactgaggct
gaaatgtctgctaaacttagagatgttgagagacagttggatgaatgctctagcacctta
aaatggaacaaggatagtgtgaaagaacttgagatgaagctaacatctgcacaggaggaa
ttgtgttcgtcaagaaaacttgctgcagaaaatgaggaacgtctttgtgctgaaatatca
acagtcaataagcttgttgaactttacaaagaaagttctgaggagtggtctaagaaggca
acagaactcgagggtgtcataaaagccttggagacacatttgaaccaagttgagagtgat
tataaggagaagcttgtaaagggagaatctgaaagaaatcgtttggaagaggtggctgca
gatttgaaagtgaaactggaaaagtgtgaagcagagattgaacttagtaggaaaaagaac
gaactcactctttgtcccatcagcagctttgctccagatgttttgataaatccgaaggaa
agtagtgatgtggttgatgactatcacaaattcgaacccagggtacctgtaggtgtttct
gggacagctttagcggcttcactgttgcgtgatggttggagtttggccaaaatgtatgcg
aagtaccaagagactgttgatgctttgcggcatgagcagatgggaaggaaagaagctgag
gcagttctgcagagggtgctatgtgaattagaggataaagcagaagtcattttagaggaa
agagcggaacacgagggaatgatcgagtcatattccttgttaaaccaaaaattgcagcat
tctatttctgaacaggcaattttggagaaatctgttcaagaattgaaggctgttttgaag
agacatgaacgtgattacatgttaattcagagagagaacgttgacctttcaagacaggtt
acaattcttctaaaggaatgtcgagacgtacaacttcgctgtggatctgctggacatgat
gttcttgagaatctttcaacacctacatcctttcaaatcaatgtggagtctgatgcggat
agagttatatctgaatatcttcagttaaccttcaaggacataaatggattagttgaacag
aatgtccagctgagaagcctcgtacgtaaactttctgtgcagcttcaagatacagagctt
ggtttcaaggagaaactggaggctgaactgaaaagtaaaactcaagaagctgcatctaga
gttgaggcagtgttgcaaaaagttgaagagcagggacagatgattgagtcccttcatgcc
tccgttgctatgtacaaaaggctgtatgaagaggagcagaagcgtagtttgcctcactcc
cactcttctggagttgctctagcagatttttgtaggaaggaactcaagtttgtttctgaa
gattctcaggaagacacaaaggctgctctggaccaggcttctaaacgagtaagatctctt
gaggaagagcttgaaaaatctagaagcgagataaatttagtaaggactgaacgtaacaag
tttgaactcgagtcaggttttgccaaagaaaaactggctagtttcatgaaggaatttgaa
caacagagagtggaaatgaatggtgtcttggctcgtaatgtggagttctcacaactctta
gtggactaccaaggaaaactgcggaaagtttcagaatccttgcacaatgctgatgaacag
tcccggaaattaagtattgaggtgtccatcttaaagtctgaaaaggagttgttatcaaat
gctgaaaagagagcacatgatgaaatacgaaatttatctgaaagattattccgcgtgcag
gcttctctggataccattcgaagtgttgaagaagttcatgaggaggctagggttgtagaa
aggaggaaactggaggaacatgctaagcaacttgagagggaatgggcagaggcaaagaaa
gagttgcaagaagaaagggacaatgttcgaactctcactcttgatcgtgagaagacttta
aagaatgcgatgagtcatgttgaggacatgggaaaggaactagcaaacgcactacatgcc
actgctgctgctgaggcgagagctgccgtcgctgaggccaaactgttcgatctggagaag
aaaattagttcttcagctaaccaggtcattgagctggatgataggagtggacttaagtct
cacccttcaaatcaggttggcatagatttgcatagaacggaggcagaaattaagaaattt
aaagaagaagcacaagcttgtaaagaacatatgctacagtacaagagcattgcacaggta
aatgaagaagctgtgaaacagatggaatgtgctcatgaatctttcaagattgaggctgag
aaaatgaagaaatcattggaagtcgaacttcttcagcttagagagagggttgctgaactt
gaaaatgaatctattttaaaatctcaagaaatagcttctgctgctagattgaaggaagag
gctattgcatcttccctggcagatgttagaaatctgaatgaagaaaatgctgcaaaaacg
tctaagattctggaaatggaaattcagatatcctatttaaaagaagacttggaaagggaa
cagcaaaaatggcgtactgctcaagctaattacgaaagacaggttattctccagtcagag
acgattcaggagctgacaaaaacatcacaagctttggcttctttacaagaggaagcagct
gagcttcgtaaattagctgatgcttacaaaacagaaaatgaagaactgaaggccaagtgg
gaaggtgggaaagtagcacttgaggattttaagaataaagctgacaaggcatacaatgaa
ctcaatgaacagaataaaattctgcatgctaaacttgaggcattccacattcgattggcg
gagaaagatcaaaagttggctggagtttcttccgaacttaatactgagatggttggggat
tctggtatgcagagtgtggttagttacctcagacggacaaaagaaattgctgaagtagag
atctccttgctaaagaaggacaagttgagattgcagtcacaattagaaagtgctcttaaa
gctgtggagagtgcacaagcttcacttaatgctgagcgtcaaagctcaaaagcattattg
ttaaccgaggaggaaattaaatctttacaacttcaggttagggagatgaacttgcttcgt
gaaagcaatatccaactgcgagaagagaataagcacaattttgaggaatgccagaaacta
cgtgaagaatttagaaaggctaaaagtgaaacagagaactttgagagcatgctgaagatg
agagaagtggaggttgaagcctgcaaaatggaaattgaatcgcagaaagtggagaaggtt
catcttgaaagcagggtctctgagttgcttgaaaaatctaagaatatagattatgaagat
tataatcgtgtgaaggatgatgttcaaagaatgcagatggagctgaatgagaaagatgca
gaaattgcaaaagtcaaaatgcttatcattgaaagacaggaatcgatatctcaattggag
caagacctttctagttgcagatttgaactgaaggaaagggaaaagaaactgaatgatatt
caacatattgaggccaatctgaggacagatatggagaaacagaagaaattcttttctcag
tttaagcggaagcttgaaattgtctcaaaggagaaggatgaattgggcaaagaaaatcaa
gctcttttgaggcagttggaagacattaaacaagtgaatattgtcgggaaaaggtccact
ggagattcaactggtgagcagaccatagaagaaaaggacactaaaattcagatacttgag
aaacatctggagcggctgagagaagaactaaaaagagagaaggaagatagtcgtacagag
aaaagcagacggttgaaaattgagaaggcaataaaggattcttatactatcgttgagcag
gaaaaatcaaagatcttaaatgatttggagaagcataagggaaacttgaagcaagcttct
gatgaacttgagaagcttagacaatctaaaagcaatctttcggaggatgctttacctcag
ccactttcagggattggcttggacgatcttgcttctacctacgttttagctgctgagaat
tttgagaagactgtgcagtcagttttgactgatcttggagctcagaatgctacttcagag
gtttctttggtcacagatgctttggtacaaagtagtacaggtcctgatgttcctctccaa
acgcctgatgttgcagtgcctgtggctcctgtaacaaccaactttcctgccaaaatccta
gaagaacgggaaaagaaaggtcaattatccaaggcaaaagtagaaacgcgtaaagcaggg
cgaaagttggttcgacctcgtcttggaaaaccaggagggtctctgggtgatatagacatg
tcaacatcagaattaccaaacagtgaaagcaagcgtgcaacttctggaaaatcagaaact
gaaagtgaatctactacatcagcccatcagctggctcgcaagcgtgtagcgacagcttct
gaattgcatgaacatgcagttatccctggggagagcattactgaaatggcagctcctgtc
atgaagaaggctaaagggtcagataccttggctgatgacgttggtggaccatcttctacc
tctctggaaagtctcaaaactcagtcgcccttggaagaagttcctgatgtttgtgagttt
cctcatggttcaagtgaggatgcagctgatgttgaaaaagaggttgaaattgcaggggag
aaggctgataggccaaaagaattatcatctgatggatctatcagccatgaggagatacac
actgacaggatggatgaaaatctggataagcagattgtagccgtgtcagatgatgggtta
aaagatcaagctgaaccagacaactggcatctaacttcagagattggaagcgagagagag
gaaggtgaggtggcccctgaagttatggaactggagggtgccaataatgttgaaagcatt
gaaataggagacgatcatattgagccagttgcaactcctgaggcctccccatctagagtt
gatgatgatgcgatggctgtcacagacatggagattggcgagataaactcccctgagatt
caaaatgaagaaaagaatgatgagggtgatgcagctgatgaaacttccgaaattttagat
aagccaactgatagtaaccagattgatatggagagtgatcaggctgttgaaaccacctca
gtagctactgagaacgtttcgagtacaccgccagaaataaatgattcgaaacaaggtagc
cctattgttgctaaacggtcatctcctgtcggtagtagcacgtctactacaataaatttg
caagagcgagccaaggaaagagctatgctgagacaggctggagttgtttcttcattggat
agacgccctgtgagaggattgcgtggccggggtggtcggatagagcgaggtggccgtggt
caacgatctggacggggaccacctggggaatcaggtaggagttaa
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integrated database retrieval system