Cucurbita moschata (crookneck pumpkin): 111455564
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Entry
111455564 CDS
T05248
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111455564
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111455564
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Fn3_VIN3
NosD
Motif
Other DBs
NCBI-GeneID:
111455564
NCBI-ProteinID:
XP_022953043
UniProt:
A0A6J1GMA1
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All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MDPRTTSFLLSLLLIIFFNSPFAASETFNVVSFGAKPDAKTDSSKAFQAAWARACTSSTS
ASIYVPNGRFYLRHATFNGPCRNDAIDIHIDGTLVAPSDFHVNANSPNWIIFHLVNGVSI
FGGTLDGQGAGLWACKRSAKTCPRGATSLEFTDSKNIMISGLTSLNSQIFHIVVNECHNV
KMEGLKVSASGNSPNTDGIHVELSSHVTILNSDISTGDDCISIGPGTSNLWIENVACGPG
HGISIGSLGKALKEDGVQNVTVKSCRFMNTQNGVRIKSWGRPSSGFARNIRFQHLKMTNV
KNPIIIDQNYCPYNKDCPGQASGIKVSDVTYQDIRGTAATRFAMTFDCSPKFPCVGIKLE
DVKLSYKNGAAKALCSHVRGTVTGCQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcgaacaacctcatttcttctctccctactactcatcatcttcttcaattca
ccctttgctgcttccgagacattcaacgtcgtcagtttcggagccaaacccgacgccaaa
acagactcgtccaaggccttccaagcagcatgggcgcgtgcttgtacctcttctacgtcc
gcatccatttacgtcccaaatggcagattctatctccgccatgcaactttcaatgggcca
tgcagaaacgacgccatcgacatacacatcgatggcactctcgtggctccttccgacttc
catgttaatgccaactctccaaattggatcatttttcaccttgttaatggagtttccatc
tttggtggcactcttgatggtcaaggagctggattgtgggcttgcaaacgttctgccaaa
acctgccctcgtggagccacgtcgttggaatttaccgattccaaaaacattatgataagt
ggattaacatcattaaatagccagatttttcacatagtagtgaatgaatgccacaatgtg
aaaatggaaggactaaaggtctccgcttctggtaatagtcccaacacggatggtattcac
gtagagctatcatctcatgtcacaattctcaattcagatattagcaccggcgacgactgc
atctcaataggccccggcacctccaacttgtggattgagaatgttgcttgtggacctggc
catggaattagcattgggagtttaggaaaagcgttgaaggaggatggagttcaaaacgtg
acagtaaaatcttgtagatttatgaacacccaaaatggagtgagaataaaaagttgggga
aggccaagcagtgggtttgcaagaaacattcgttttcaacatctcaagatgactaatgtc
aagaatcccatcataatcgatcaaaattactgtccttacaataaagattgccctggccag
gcttcgggaattaaagttagtgatgtgacatatcaagacattcgtgggacagccgccact
agattcgccatgacattcgattgtagcccaaagtttccatgtgtgggaataaagttggaa
gatgtaaagctgagttacaagaatggagcagccaaagctttgtgcagtcatgttagagga
accgttacgggttgtcagtga
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