Cucurbita moschata (crookneck pumpkin): 111455865
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Entry
111455865 CDS
T05248
Name
(RefSeq) polygalacturonase QRT2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Module
cmos_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111455865
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111455865
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Sre
Motif
Other DBs
NCBI-GeneID:
111455865
NCBI-ProteinID:
XP_022953263
UniProt:
A0A6J1GMX8
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All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MCRGLLGRRCRLLLLLPFLVAIVVFGFFSVCSSSYADVDPPPLIIRGDGKDRDHQHYGYS
SKFSSMLTTRLEKMASSPVASSEIFNVDDYGAMGDGEDDSEAFKEAWKEACSSTNAIFLV
PIDRTYHLKPITFSGPCNSPFAFKIEGTIKASPHISDYEKDRRHWIIFENLSEFTVEGKG
TINGNGRKWWLNSCKVNKTLPCKEAPTAVTFYQCTNLRVEGLRFRNAQKMHLSFQKCSNV
KALNLWIYAPGNSPNTDGIHVTATQIILIQNCLIMTGDDCISIVSGSKNVRAKGITCGPG
HGISIGSLGAGKSEAEVSNVVVDTAKFTGTSNGVRIKTWQGGKGYAENIIFQNIVMDNVT
NPIIIDQNYCDQKEPCTQQAEAVQVSNVMYQNIRGTSGSEVAVKFDCSESFPCQEILLQD
IDLVHRDKADDKPTQAEASCKNARLKNRGRVSPQCPGRR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcggggattgctcggtcgtcgttgtcgtcttcttcttcttcttccctttctcgtc
gccattgtcgtttttgggtttttctcggtctgctctagctcgtacgctgatgttgatcct
ccccctttgattatccgtggtgatgggaaggatcgtgatcaccaacattatgggtactct
tccaaattctcgagcatgttgacaacgaggttggagaaaatggcatcgtcgcccgtggca
tcgtcagagatatttaatgtggatgattatggggcaatgggcgacggagaggacgatagc
gaggcttttaaagaagcttggaaggaagcttgttcgtccacaaatgccatctttttggtt
cctatcgatagaacttatcatcttaagccaatcactttctccggcccttgtaactctcct
tttgcatttaagattgaagggacaataaaagcctccccacatatatcagattacgagaaa
gacagaaggcattggattatatttgaaaatctatcagaatttaccgtggaaggtaaaggc
accattaatggaaatggaagaaaatggtggttaaattcatgcaaagtcaacaaaactcta
ccctgcaaggaagctccaacagctgttactttctatcaatgtaccaatctgagagtggaa
gggctgaggttcagaaatgcacaaaagatgcatctttcctttcagaaatgcagcaatgtc
aaagctctaaatctatggatttatgcaccaggaaacagccccaacactgatggcattcat
gtcacagccacacaaatcattctcatccaaaactgtcttataatgactggtgatgactgt
atttcgatcgtaagtgggtcgaaaaatgttcgagcaaagggcataacttgtggaccgggc
catgggatcagtattggaagcttgggagctggaaaatcagaagctgaggtttctaatgtg
gtggttgatacagcaaagtttacaggaacatcaaatggagtgagaatcaaaacttggcag
ggaggcaaagggtatgcagaaaacataatattccagaacattgtgatggacaatgtgacc
aacccaataatcatagatcaaaactactgtgatcagaaagaaccatgtacacaacaggca
gaagcagtacaagtgagtaatgtaatgtaccagaacatcagaggcacaagcggttcggaa
gtggctgtgaaattcgattgcagcgaaagcttcccatgtcaggagattcttctacaagac
atcgatcttgtccacagagataaagcagacgataaacccacccaagccgaagcttcctgt
aaaaatgccaggttgaagaatagaggaagggtttctccacagtgccctggacgacgatga
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