KEGG   Cucurbita moschata (crookneck pumpkin): 111455939
Entry
111455939         CDS       T05248                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmos03036]
    111455939
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111455939
Chromosome and associated proteins [BR:cmos03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    111455939
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     111455939
SSDB
Motif
Pfam: MMS19_N MMS19_C
Other DBs
NCBI-GeneID: 111455939
NCBI-ProteinID: XP_022953368
UniProt: A0A6J1GN60
LinkDB
Position
Unknown
AA seq 1148 aa
MAELSKLTQYIESFVDVSHTPSQQATSLEAIISLVKNNVVTIKTLVTEMGMYLTITDHII
RGRGILLLGEVLTCLASKPLDDATIHSLMTFFTERLADWKALRGALIGCLALMRRKTEVG
AVSQNDAKSFAQSYFQNLQVQSLGQHDRKLSFELLVCLLEHYPDAVVSLGDDLVYGICEA
IDGEKDPHCLMLTFHIVELVAKLFPDPTGTLASSSSDLFEFLGCYFPIHFTHGKEEDVDV
TRNDLSRALMMAFSSNPLFEPFAIPLLLEKLSSSLPLAKIDSLKYLSDCTVKYGADRMEK
HSEAIWSSVKEIIFTSIEQPSLSFNLESLDSPSFQGNEMIIEALRLLQKMVVESNGSFLR
LIINDEDIKEILNSLNIYTCYNDLPLQSRQRLNAVGHILYKSANASVASCNHVFESFFPC
LLDFVGISVDQSDNYKISPSRNFNFGALYLCIELLAACRDLYASCDEQTCSVKEKSYNML
QTFSCALVQLLNSTFPGIAKKDLHDAEFYCAVKGLRNLAIFPVGSSPISSVVFEDILLGL
MSFITMNLECGSLWNHALKALQHIGSFVDRYHGSVEWQSYMHVVVEKIAPMFSLHDEALP
LTLKLKMASDIGRSGRSYMLKIVQGIEEATSFHLSEVYSNGNSKSVEILLSLLDCYSTKI
LPWFDEAGDFEEVILRITINIWDQIEKCLVFSTSMDKALLDSTMMALKLSVRSCSKESQN
IIIQKAFNVLLTSSFSPSKVALSTTIPVKMEGLQLLQQKDSPLSRDEWILSLFASVIIAL
RPQIHVPDVRSVMRLLMLSITRGCIPAAQALGSMINKLSLKSDKVEVSNYVSLEEAIDII
FNTKFRCFHNESTRDGSEMLLTDLCSSIEKGSLLPVHAVVGLSWIGKGLLLFGHEKVRDV
TMVFLQCLVSKSRTDASPLQKVILEKDCETNLDFGVMNGAADAFHILMSDSEACLNRKFH
AILRPLYKQRFFSTMMPIFQSLVSKSDESLSRYMLYEAFAHVISDTPLTAIMSDAKKVSL
NLIPMLLDGLLALSVNIINKDVVYSLLLVLSGILMDKNVQEAVTENAHKIVDCLAGLTAF
PHMMLVRETSIQCLVAVSELPHARIYPMRMQVLHAISKALDDPKRAVRQEAVRCRQAWAS
IASRSLNF
NT seq 3447 nt   +upstreamnt  +downstreamnt
atggcggagctcagtaagcttacacagtacatcgagtccttcgtcgacgtatctcatact
ccgtctcaacaggccacaagcttggaagcaatcatctcccttgtgaagaacaatgttgta
acaataaaaactctggttacagagatgggtatgtatttgacaattactgatcacattatt
cgaggcagaggtatacttcttcttggggaagtacttacatgtcttgcatcaaagcctctg
gacgatgcaacaatacacagtctaatgacgttttttacagagagactggcagattggaag
gctttacggggtgcccttattggctgcttggcactgatgaggaggaaaacggaagttggg
gcagtttctcagaatgatgcgaagtcttttgcccagtcttattttcaaaatcttcaagta
cagtccttgggacagcatgatcggaagctgagttttgaacttctggtgtgccttttggaa
cattatcctgatgctgttgtttcactgggtgatgatcttgtgtatggaatctgtgaagcc
attgatggtgaaaaagatccacactgcttaatgcttacttttcacatcgttgagcttgtg
gcaaagctattcccagatccaactggaacacttgcaagtagttctagcgatctttttgaa
ttcctgggttgctatttcccaatacattttacacatggaaaagaggaggatgttgatgta
acaaggaatgatctttcgcgggcacttatgatggccttctcatcaaaccccctctttgag
ccatttgcaatacctttgcttcttgagaagctttcatcgtcattgccactggcaaagatt
gattctttgaagtatctgagtgattgcaccgtaaaatatggggcagatagaatggaaaag
catagtgaagctatctggtcttcagtaaaggagatcatatttacatcaatagaacaacct
tctttgtcctttaacttagaatcattggatagtcctagctttcaagggaatgaaatgata
atagaagctctaagactcctgcagaagatggttgtggagagtaatggatcatttttaaga
ttaattatcaatgatgaagatataaaggaaattttaaacagcctaaatatttatacatgt
tacaacgacctccctctgcaaagcaggcagagactaaatgcagttggccatatcctttac
aagtcagcaaatgcatctgttgcttcctgcaaccatgtgtttgaaagtttcttcccttgt
ttgctggatttcgtggggatttcagtggaccagtctgataattacaaaatttctccctca
aggaattttaactttggagccctctatctctgcatcgaactacttgcagcatgcagagat
ctgtatgcaagctgtgatgaacaaacatgctctgttaaagagaaatcatacaacatgctt
caaactttttcgtgtgcattggttcagctcctcaattctacctttccaggaattgctaag
aaagatctgcatgatgctgaattctattgtgcagtaaagggcttgcggaatctggccata
ttccctgtaggttcttcacccatatcaagtgtcgtatttgaggatattttgttgggtctc
atgtcatttataaccatgaacctcgaatgtggatcgttgtggaatcatgccttgaaggca
ttacagcatattggctcatttgttgacagatatcatgggtccgtggaatggcaaagttac
atgcatgttgttgttgaaaagattgcaccaatgttctctcttcatgacgaggccttgcca
ctgacacttaaacttaaaatggcttctgacattggtagatctgggcgaagttatatgctg
aaaattgttcaggggattgaagaggcaacgtccttccatttatctgaggtttatagcaat
ggcaattcaaagtcagtcgagattctattgtccctgttggattgctactcgaccaaaatt
cttccatggtttgatgaggctggagattttgaggaagtcatattgcgcattacaattaac
atttgggatcaaattgaaaaatgtttagtttttagcacatcgatggataaagcacttcta
gattccaccatgatggcattgaaactctctgttcgaagttgttcgaaagagagccagaac
attataatccaaaaagcattcaatgtattgttaacaagcagtttttctccttcgaaagta
gcattatctacaacaataccagttaagatggagggcttacaacttctgcagcagaaagat
agtcctctttctagagatgaatggatcctttcattatttgcatcagtcattatagcactt
cgtccacaaatacatgttcctgatgtgagatcagtaatgcgtttgcttatgttatccatc
accaggggctgtataccagctgcacaggcactaggttctatgatcaataaattgagtctg
aagtctgataaagtagaagtctcaaattatgtttctttggaagaagctattgacattatt
ttcaacacaaaatttaggtgcttccataatgaaagtactcgtgatggcagtgaaatgctg
ctcacagatttatgctccagcattgaaaaaggctctttgcttccagttcatgctgtggtt
ggattatcatggattggaaaaggtttgcttctttttggtcatgaaaaggtccgagatgtt
accatggttttcttgcagtgcttagtatcaaaaagtagaacagatgcctcacccttgcag
aaggttatactggaaaaagattgcgagacaaacttagactttggagtcatgaatggtgca
gcagatgcatttcacattcttatgagtgattctgaagcatgtttgaaccgcaaattccat
gcaatactacgaccactttataagcagcgttttttctctaccatgatgcctattttccag
tctctagtaagcaaatctgatgagtcactttccagatatatgttgtacgaggcatttgca
catgttatatctgatactccactcactgctataatgagtgatgcgaagaaggttagctta
aatcttattcctatgcttttggatgggctgttagcattaagtgtgaacatcataaataag
gacgtggtctatagccttcttcttgttttatctgggatattgatggataaaaatgtacaa
gaagctgtcacagagaatgcacataaaattgttgattgccttgctggactgactgccttt
cctcatatgatgcttgtacgagaaacttctattcagtgccttgtcgcggtatctgagcta
ccccatgcaaggatataccccatgagaatgcaggtactgcatgcaatatcgaaagctctt
gatgatccaaagagagctgttcgacaagaagctgttcgatgccggcaagcatgggcatca
attgcatcaagaagtcttaatttctga

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