Cucurbita moschata (crookneck pumpkin): 111455942
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Entry
111455942 CDS
T05248
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmos03021
]
111455942
Transcription machinery [BR:
cmos03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
111455942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
111455942
NCBI-ProteinID:
XP_022953373
UniProt:
A0A6J1GN64
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MASYRPYPPQSSFGPSPGQNPIPPPPAPPAASVPTQQRGGSQYNQNWGGYGGDGSVPPPA
SSSSYPQNYNQVHQSSNYHQQHYGPPRSQQPPPPPPPHQSYPYAPQPPPPPPPDSSYPPP
PPPPASSQPSQHYFPPSQYPQGNQNQQSIQPPPPPPSSPPPSSSIPPPPPPNSPPPPSAP
QQKTEGSSVGAHERDKGVSKDPSYGRRERENSNHDKHQRHSGPPMPPKKSNGPSGRIETD
DEKRQRKKREFEKQRQDERHRHHLKESQNTILQKTQMLSTGKGHGSIVGSRMGERKATPF
LSGERIENRLKKPTTFLCKLKFRNELPDTSAQPKLMSLRKEKDHYTRYTITSLEKTYKPQ
LYVEPDLGIPLDLLDLSVYNPPSVRIPLAPEDEELLRDDVLKTPVKKDGGIKRKERPTDK
GVAWLVKTQYISPLSIESTKQSLTEKQAKELREMKGGRNILENLNNRERKIKEIDASFEA
CKSRPVHATNKNLYPVEVLPLLPDFDRYDDPFVVVAFDNAPTADSETFNKLDQSIRDAHE
SQAIMKSYMATGSDPSKPEKFLAYMVPSPDELSKDIYDEQEDVSYSWVREYHWDVRGDNV
DDPTTYLVSFDDAEARYVPLPTKLVLRKKRAKEGRSNDEVEHFPAPARVTVRRRPTVATL
EVKDPGVYSNLKRGSDIEDGLGRSHKHDRHQDMDQYSGAEDDMSD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttacaggccatatcctccacaatcgtctttcggtccttcaccgggtcaaaac
ccgattccgcctccaccagcgccaccggcggcttccgttcctacgcaacagcgagggggt
agtcagtataatcagaattggggtggttatggtggtgatgggtccgtgcctcctcctgct
tcatcttcatcgtatccccaaaattacaaccaagttcatcaaagttctaattaccaccag
caacattatggtccgccgagaagccaacagcctccacctcctcctcctcctcaccagtcg
tatccttatgcaccacagccgccgccgcctccgccgcccgattcttcctatccaccgcct
ccacccccgccagcgtcttcgcaaccttctcaacattacttccccccttcacaatatccc
cagggtaatcaaaatcagcagtcaatccagccaccaccacctccgccctcatctccaccc
ccgagctcctcaatcccgccgcctccaccccctaattctccaccacctccatcagcgcct
cagcaaaaaacagagggttcaagcgtgggagcacacgagcgtgataaaggggtttcaaaa
gatccctcatatggcaggcgtgaacgtgaaaattcaaatcatgataaacaccagaggcac
tctggtcccccaatgcctccgaagaaatcaaacggcccgtcagggagaatagagactgat
gatgagaaaagacagaggaagaagagagagttcgaaaaacaaaggcaagatgaaaggcat
agacatcatctaaaagaatcccaaaacactattctgcaaaagactcaaatgttatctact
gggaaggggcatggatcaattgtggggtcccgaatgggggaaaggaaggccactccattt
cttagtggtgagaggatagaaaataggttgaagaagccaacgacatttttgtgcaagttg
aaattccggaacgagcttccagatacaagtgctcagccaaaactcatgtcgctgcggaaa
gagaaggatcactatacaagatatacaatcacttcactagagaaaacgtacaaacctcag
ctttatgtagagccggatcttggaatacctctggatttgcttgacctcagtgtatacaac
cctcctagtgttagaataccccttgctcctgaagatgaggaattattacgtgatgatgta
ttgaaaactccggttaaaaaggatggtggtattaaaagaaaagaacgtcctactgataaa
ggtgttgcctggcttgttaagacccagtacatctctcctcttagcatagaatccacgaaa
cagtctttaactgaaaaacaagccaaagaactgcgagaaatgaagggagggcgcaatatt
ctcgagaacctcaataatagggaaaggaaaattaaggaaattgatgcatcattcgaggca
tgcaagtcacgccctgttcatgcaaccaataagaacttatatcctgtggaagttttacct
cttctacctgattttgatcggtatgatgatccatttgttgtggtcgcatttgacaatgct
cccacagctgattcagagacttttaacaagttagatcaatccattcgtgatgcacatgaa
tcacaggcgataatgaaaagctatatggcaacaggctcagatccttcaaaacctgagaaa
tttcttgcttacatggttccttctccagatgagctgtcgaaggatatttacgatgaacaa
gaagatgtctcgtattcctgggttcgtgagtaccactgggatgtacgaggagacaatgtg
gatgaccccactacatatctcgtttcatttgatgatgcagaggctcgttatgtgccactt
cctacaaagctcgttcttagaaaaaagagggctaaagaaggcagatcaaatgatgaggtt
gaacattttcctgcacctgcaagagtgactgtaaggagaagaccaactgtagctactttg
gaagtgaaggatccaggggtttactctaatttgaaaagagggtcagatatcgaagatggt
cttgggagatcacacaaacacgatagacaccaagacatggatcaatacagtggagctgaa
gacgacatgtccgattga
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