Cucurbita moschata (crookneck pumpkin): 111456162
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Entry
111456162 CDS
T05248
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111456162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmos03041
]
111456162
Spliceosome [BR:
cmos03041
]
Common components
Common spliceosomal components
SR proteins
111456162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
111456162
NCBI-ProteinID:
XP_022953713
UniProt:
A0A6J1GP36
LinkDB
All DBs
Position
Unknown
AA seq
309 aa
AA seq
DB search
MSSRASRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQD
AISGRDGYDFDGHRLRVELAHGGRGHSSSSDRYSSHGSSRGGRGVSRRSDFRVLVTGLPS
SASWQDLKDHMRRAGDVCFSQVFRDGSGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSRS
YVRVREYDSKRDSSKSPSRGRSYSRGRSYSRSRSRGRSRSKSRSRSKSPKGKSSQRSPVK
SRSRSASPARSRSKSSSLSGSRSRSRSPAPNREKRTSKSPKRREASKSPSRSRSRSRSRS
KSKSKSPSR
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgtgccagcagaacagtctatgttggcaatctcccgggtgatattcgtgaa
aaagaagtggaagatttattttacaagtatggtcgcatagcccacattgatctcaaggtt
ccaccaaggcctcctggttatgcatttgttgagttcgaagatgcggaagatgctcaagat
gcaattagtggtcgcgatggctatgattttgatggccataggttgcgcgtggaacttgct
catggtggtcgtggtcattcatcatctagtgatcgttatagtagtcatggaagcagccga
ggtgggcgtggagtatctcgacgttctgattttcgtgtattagtcacaggattaccttct
tctgcttcgtggcaagacttgaaggatcacatgcggcgagctggggatgtttgtttctcc
caagtgttccgtgatggtagtggaaccacagggattgtggattacaccaactatgatgac
atgaagtatgcaattaaaaaactggatgactctgagttccgtaatgcattttcccggtct
tatgttcgtgtgagggaatatgattcaaagagagattcatccaagagtcctagtcgtggg
cggtcatactctagagggcggagttatagtcgcagtcgcagtagaggtcgaagtaggagc
aagagtcgcagtaggagcaagtctcctaagggtaaatcttcccagcggtcacctgtaaaa
tcccgatcaaggtctgcttcccctgctcgttcacgatcaaagtcatcatctctttcagga
tcgcgatcaagatccaggtctccggcacccaatcgtgagaaacgtactagtaaaagtcca
aaaaggcgtgaagcaagcaaaagccctagcaggagcaggagcaggagcaggagccgaagc
aagagcaagagcaagagtccttcccgatga
DBGET
integrated database retrieval system
