Cucurbita moschata (crookneck pumpkin): 111456177
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Entry
111456177 CDS
T05248
Name
(RefSeq) tRNase Z TRZ3, mitochondrial
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmos03016
]
111456177
Enzymes [BR:
cmos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
111456177
Transfer RNA biogenesis [BR:
cmos03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
111456177
Prokaryotic type
111456177
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
111456177
NCBI-ProteinID:
XP_022953731
UniProt:
A0A6J1GNW7
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MPLPHLSTLRFLFLSSFPALSPSKFPSFCSPKSRSIFTVLAASSPRRRRSGAPPSQSFNR
RNNSSLRESKGKEKSVAMEETEAASFGFNKRRAEGRDKGDLAKKNLQLKVRRLNPVNTIA
YVQILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCSE
TAGGLPGLLLTLAGIGEAGMSVNVWGPSDLKYLVDAMKSFIPNAAMVHTRSFGPALSSDV
DATHELSKFCDPIVLVDDEVVKISAILVHPSSNRGFQPFNEDDMGQSNRSQEERRNHDSE
ARSSTSKSSSAVKPGDMSVVYVCELPEIKGKFDPSKAASFGLKPGPKYRELQLGNSVMSD
RQKIMVHPSDVLGPSVPGPVVLLVDCPTEAHVLELMSLQSLKTYYEDLSDQTETGKVVTC
VIHLSPTSILGSPNYQKWVKRFGSSQHIMAGHDRKNVSIPILKSSAKIAARLNHLCPQLF
PAPGFWSPQQLTLPGSDSCASTEIEVSDHYKSTLAENLLKFTLRPYAQLGFDRSSIPSQE
SLSEVINGLHSDIPEILDAVHHVSQLWSGSAGTDVKIHVEDSHAMVEEPWLNENNVPSCL
ENIRRDDLEIVLLGTGSSQPSKYRNVSSIYINLFSKGSMLLDCGEGTLGQLKRRYGIEGA
DAAVRGLRCIWISHIHADHHTGLTRILALRRDLLREVPHEPVLVIGPRQLKRYLDAYQIL
EDLDMQFLDCKYTTQASLEAFQKVATEIDNSSLEGPISSTDGNNIDGAKKPVSSLFVRGS
RMQSYRKGPSSPIDINAAMPLLKYMNKVLNEAGLEALISFPVVHCPQSYGVILKAAERVN
LDGKVIPGWKIVYSGDTRPCPELMEASRGATVLIHEATFEDSLMDEAVAKNHSTTSEAVD
IGNSAGAYRIVLTHFSQRYPKIPVIEERHMHKTCIAFDLMSVNVADLLVLPKVLPYLKLL
FRNEMMVDESDDIVTLEA
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgccattgccgcacctttcaactcttcgcttcctcttcctctcttctttccccgctctc
tctccttcaaaattcccttccttctgctctcccaaatcccgttctatcttcaccgttctc
gccgcttcctccccaagacgccgccgcagcggtgcccccccttcgcaaagtttcaatcgg
agaaacaatagtagtttgagagagagcaaaggtaaagagaaatcggtggctatggaggag
actgaggctgcgtcttttgggtttaacaagaggagggccgagggcagagataaaggtgat
ttggccaagaagaatctccagcttaaagttaggaggttgaacccggttaatacgattgct
tatgtccagatactaggaactggaatggacactcaagatacgtcgccttcggtcttgctt
ttcttcgataaacagagatttatttttaatgctggagaggggttgcaacgattctgcacg
gaacataagattaagttatcgaagatagatcacatattcctttcccgcgtctgttcagag
actgctggtggacttcctggattgctgctgactctagctggcattggagaagccggaatg
tctgtcaatgtctggggtccttctgatttgaagtatttagtcgatgcaatgaaatctttc
ataccaaatgctgccatggttcacacacggagctttggacctgcacttagttctgacgta
gatgcaacccatgaattgagtaagttttgtgatcccattgtccttgttgatgatgaggtg
gtcaagatatcagcaattttggtacatccaagttcaaatagagggttccagcccttcaat
gaggatgacatgggccaatcgaacaggagtcaagaagagagaagaaaccatgattctgaa
gctagaagttcaacaagcaaatcttcatctgcagtaaagccaggtgacatgtctgtagtg
tatgtatgtgaacttcctgaaattaaggggaagtttgatccatcaaaagcggcttctttt
ggtcttaaacccgggccaaaatatcgcgaattacaacttggaaattcagtgatgtcagat
cgccaaaagatcatggttcatccaagtgatgtccttggcccttcagttcctggtccagtt
gtgttacttgttgattgtccaacagaagctcatgtgttagagttaatgtccttgcaatct
ctgaaaacttattatgaagacttgagcgatcagactgaaactggcaaggtggtaacatgt
gttattcatctaagtcctacatccatccttggtagtcctaattaccagaaatgggtgaaa
agatttgggtcatcccagcacatcatggccgggcacgataggaagaacgtttcgattcca
attctaaaatccagtgcaaaaattgctgcaaggcttaatcatttgtgccctcagttattt
ccggccccaggcttttggtcccctcagcagcttactttaccaggatcagattcctgtgct
tcaactgagatcgaagtttcagatcattacaaaagcacattagctgaaaatcttcttaag
tttactttgcgcccctatgcgcaacttggattcgatcgatctagtattcctagtcaggaa
tctctgtcagaggttattaatgggctgcattctgacataccagaaattttggatgctgtt
catcatgttagtcagctttggagtggttctgctggaacagatgtgaaaattcatgttgaa
gatagccatgcaatggttgaagagccatggctcaatgagaataatgttccaagttgtctg
gaaaatattaggagagatgacttggaaattgttcttcttggtacagggtcgtcccagcca
tctaagtacagaaatgtcagttctatttacattaatcttttctcgaaaggaagcatgcta
ctagattgcggtgaaggaacgttgggtcagcttaaaagaagatatggaattgagggtgct
gatgctgctgtgaggggcctaagatgtatttggatttctcacatccatgcagatcatcac
acaggactgacccgaatactagctttacggagggatctgttgcgggaagttccccacgaa
cctgtactagtaatcgggccaagacagctcaagagatatttggatgcataccaaatatta
gaagatttagatatgcagttccttgattgtaagtacacaacacaagcttcattggaagct
tttcagaaagttgcaacagaaattgataattcatccttagaaggtcccatcagttccaca
gacggaaacaacatagatggagccaagaaacccgtgtcgagtttattcgttaggggatct
cgcatgcagagctaccggaagggtcctagtagtccaattgatatcaatgcagccatgcca
cttcttaaatacatgaataaagttctgaatgaagctggtctggaagctttaatcagcttc
ccagttgtgcactgtccacagtcttatggtgtaatcttaaaggcggctgaaagggttaac
ttagatggaaaagtgattcctgggtggaagattgtttactcaggtgacactcggccctgt
cccgagctgatggaagcatctcgtggtgcgacggttcttatacacgaggccacttttgag
gacagcttgatggatgaggccgtggctaaaaaccacagcacaacttcagaagctgtagac
atcgggaactcggccggagcgtatcgaattgtccttacacacttcagtcaaagataccct
aaaattccagtgatcgaagagagacacatgcacaaaacctgcattgcatttgacttgatg
agtgttaatgttgcagatttgttagtactacctaaggttcttccctacttgaaactcctt
ttcagaaatgagatgatggtagacgaatctgatgatattgtcactttggaggcttaa
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