Cucurbita moschata (crookneck pumpkin): 111456212
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Entry
111456212 CDS
T05248
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
111456212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111456212
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
111456212
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
111456212
NCBI-ProteinID:
XP_022953789
UniProt:
A0A6J1GQR4
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MLKMVSAFPEDVLEHVFSFIQCHKDRNSISMVCKSWYEIERRCRKRVFVGNCYAVSPRIV
TRRFPKVRSVELKGKPHFADFSLVPDGWGGYVYPWIVAMASAYPFLEEIKLKRMVVTDES
LELISKSFKNFKVLVLMTCEGFSTDGLAAIAANCRNLEVLDLRESDVEDLNGHWLSHFPE
TYTSLISLNFACLGSEVSISALERLVDRCPNLQTLRLNRPVPLDRHASLLRRAPQLVEFG
AGCYTADLRSEVFSNLTGAFTSCTELKSLSGFWDVVPAYLPSVYPTCSRLTSLNLSYAII
QCDDLTKLITQCHNLQKLWVLDYIEDSGLEALAGICKDLRELRVFPSEPYGPEPNVSLTE
QGLVSVSEGCPKLQSVLYFCRQMTNAALVTIARNRPNMTRFRLCIMEPRTPDYVTNQSLD
VGFGAIVEYCKDLQRFSLSGLLTDRCFEYIGTYGKKLEMLSVAFAGNSDLGLHHVLSGCD
SLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLAQKFPQLNVEVIDER
GPPNTRPESCPVERLYIYRSVAGRRSDMPGFVWTIDGDAPLRLT
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatggtgagcgcgtttccagaggatgtgttggagcatgtgttttcgtttata
cagtgtcataaggacaggaactcgatctccatggtgtgcaagtcgtggtatgagattgag
agacggtgtaggaagagggtttttgttgggaactgttatgcggtgagtcctcggattgtg
accaggaggtttccgaaggtgagatctgtggagctcaaagggaaaccgcactttgcggac
tttagtttggtgcctgatggttggggtgggtatgtttatccgtggatcgttgctatggct
tctgcttatccttttctggaggagatcaagttgaagagaatggtggttacggatgagagt
ttggagctcatttccaagtcttttaagaattttaaggttcttgtgttaatgacatgcgag
gggttcagtacggatgggcttgcggccattgctgccaattgcaggaatttggaagtattg
gacttacgagagagtgatgtggaagatctaaatgggcactggctaagccattttcctgaa
acctatacctcactgatatccctcaattttgcttgtttggggtcagaggtgagtatttct
gcattggagcgtctcgtggataggtgtccaaacttacagacactgcgcctcaatcgtcca
gttccccttgatcggcatgccagtctacttcgtcgtgcacctcagctggttgagtttggc
gctggatgctacacagctgacttgagatcggaagttttttcgaacttaactggtgcattt
acaagctgtactgaattgaagagtctatcgggattttgggatgttgtccctgcatacctt
ccttccgtttatccaacttgctctaggctcacatccttgaacttgagctacgctataatt
caatgtgacgatcttaccaagcttatcactcagtgtcataatttgcagaagctttgggtg
ctggattacattgaagattctggccttgaggcccttgcaggtatctgcaaggatcttcga
gaattaagagtgtttccatccgaaccatatgggccggaaccgaatgtgtctttgacagaa
cagggtcttgtctctgtttctgaagggtgtccaaagctccaatctgttctgtacttctgt
cgtcaaatgacaaatgctgccttagtgaccattgccaggaatcgtccgaacatgacccgt
tttcgtctatgtattatggagccacgaactcccgattatgtcacgaatcagtcgcttgat
gtaggctttggtgccattgttgagtattgcaaagatctccagcgtttttccctttctggc
cttctgacagatcgatgtttcgagtatataggaacttacggtaagaagctagagatgctg
tctgtggcatttgctggtaatagtgacttaggacttcatcatgtgttgtctggatgtgat
agtcttcgcaagctggagattagggactgtccttttggtgataaagctcttttggccaat
gctgcaaagctcgagacaatgcgatccctttggatgtcttcttgctctgtgagttttgga
gcatgcaaattgttagctcagaagtttccccaactaaatgtcgaagttatagacgagagg
ggtcccccaaatacaaggcctgaaagttgccctgtggagaggctttacatataccggagt
gttgccgggcgtcggtccgatatgcctggtttcgtatggacaatcgacggagatgctcct
ctaaggcttacttga
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