Cucurbita moschata (crookneck pumpkin): 111456407
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Entry
111456407 CDS
T05248
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111456407
03041 Spliceosome [BR:
cmos03041
]
111456407
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111456407
Spliceosome [BR:
cmos03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111456407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_7
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
111456407
NCBI-ProteinID:
XP_022954023
UniProt:
A0A6J1GPY9
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAHPQLEPIPSGNLPPGFDPSTCRSVYVGN
VHTQVTEPLLQEVFGSTGVVESCKLVRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
IKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFACFSVFPSCSDARVMWDQKTGRSR
GFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGSNEDKQSSDVKSIAELTNGS
SEDGKETVNSDAPENNPQYTTVYVGNLAPEATQVDLHRHFHALGAGVIEEVRIQRDKGFG
FVRYSTHAEASLAIQMGNTQSYLCGKQIKCSWGSKPTPPGTISNPLPPPAAGSIPGLSAT
DILAYERQLAMSKMGGVHALMQPQIPHPLKQAAMGGMGAAGSSQAIYDGGFQNVAAAQQL
MYYQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcagagattgaagcaacaacagcaacaagctttgatgcagcaagctttgctt
cagcaacagtctctttaccatcctggtctcttagctcaccctcagctcgaaccaattcca
agtggaaatttaccaccaggttttgatccaagtacctgccgcagtgtgtacgtaggaaat
gtacatacacaggtaactgaaccacttcttcaagaggtttttgggagtacaggcgttgtt
gaaagctgcaagcttgttagaaaggagaagtcatcctatggatttattcactattttgat
cgcagatcagctgctatggctattttgtcacttaatgggaggcatttgtttgggcagcct
atcaaagtaaattgggcttatgctagtggtcagagagaggatacatcaggtcatttcaac
atctttgtgggtgatcttagccctgaagttactgattctactttgtttgcatgcttttct
gttttcccaagctgttccgatgccagagttatgtgggatcagaagactgggcgttccagg
ggatttggttttgtttcttttcgcaaccaacaggatgctcaaagtgcaataaacgacctg
actggtaagtggcttgggagtagacagattcgttgcaactgggctacaaaaggtgctgga
tccaatgaagacaagcagagctcagatgtgaaaagcattgcagaacttacaaatggatca
tctgaagatggtaaagagacggtcaatagcgatgctccagagaacaatcctcagtacact
actgtttatgttggcaatcttgctccagaggccacgcaggttgatcttcatcgccatttt
catgctcttggggctggtgtgattgaagaggttcgcatccagcgcgataagggctttggt
tttgttagatatagcactcatgctgaggcttctttggctattcagatggggaatactcag
tcgtatctttgtggcaaacagatcaagtgctcttggggaagcaagccaaccccacctgga
accatctcgaacccgcttcctcccccggcagcaggttcaatcccaggactctcagcaact
gatattttagcgtatgagcggcaactggctatgagcaagatgggtggcgtccatgcactt
atgcagcctcagataccacatcctttaaagcaggcagccatgggggggatgggtgccgct
ggctcaagtcaggccatctatgatggtggcttccagaacgttgcggcagctcagcagctc
atgtattatcagtaa
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