KEGG   Cucurbita moschata (crookneck pumpkin): 111456412
Entry
111456412         CDS       T05248                                 
Name
(RefSeq) autophagy-related protein 18a-like
  KO
K22991  WD repeat-containing protein 45
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmos04131]
    111456412
Membrane trafficking [BR:cmos04131]
 Autophagy
  Other autophagy associated proteins
   Others
    111456412
SSDB
Motif
Pfam: PROPPIN WD40_Prp19 Beta-prop_THOC3 BCAS3_WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR3_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_RSE1_2nd Beta-prop_Vps41 CFAP251_N Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_IFT140_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Nucleoporin_N Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_EMC1_N PEP5_VPS11_N Izumo-Ig Beta-prop_IFT80_2nd
Other DBs
NCBI-GeneID: 111456412
NCBI-ProteinID: XP_022954028
UniProt: A0A6J1GPZ4
LinkDB
Position
Unknown
AA seq 415 aa
METLSAFPSPPWPNPEPNPPPAVAESERFDSDSVSSEPPQLLPQLPQTVETTVSSTAVEP
AASQPSLLHLSFNQDHGCFAAGTDRGFRIYNCDPFREIFRRDFDRGGGIGVVEMLFRCNI
LALVGGGPDPQYPCNKVMIWDDHQSRCIGELSFRSAVRGVRLQRDRIIVILEQKVFVYNF
ADLKLLHQIETIANPKGLCAVSQLSTSLVLVCPGLQKGQVRVEHYASRRTKFIMAHDSRI
ACFALTTNGQLLATASTKGTLVRIFNTVDGNLLQEVRRGADRAEIYSLAFSSTAQWLAVS
SDKGTVHVFSLKVNSGSLGNDMSHQNDSSLSVAPSGSSFSFIKGVLPKYFKSEWSVAQFR
LHEGSQYVVAFGHQKNTVVILGMDGSFYRCQFDSVNGGEMTQLEYHNFLMPEEAF
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggagaccctctcagccttcccgtcgcctccatggccgaatcccgaacccaaccctccg
ccggccgtcgctgaatccgaacgcttcgattccgattcagtttcatcggagccgcctcag
ttgctgccccagttgccgcagacggtggagacgaccgtttcgtccacggcggttgaaccg
gctgcttcgcagccttctctgctacatctctccttcaatcaggaccatggctgcttcgct
gcggggactgaccgggggtttcggatctacaattgcgatccattccgtgagattttccgg
agggattttgaccgtgggggtggtattggcgtcgttgagatgctttttcggtgtaatatt
ttggctcttgttggtggtgggcctgaccctcagtatccatgtaataaggtcatgatttgg
gatgaccatcagagccggtgtattggtgagctttcgtttaggtctgctgttcgcggtgtt
cgtctacagagagaccggattattgttattttggagcagaaggtttttgtgtacaatttt
gcggacttgaagttgctgcatcagatcgaaacgattgcaaaccctaagggtctttgtgct
gtttcccagttgagtacttcgcttgtgcttgtctgccccggactgcagaaggggcaggtt
agggttgagcattatgcctctcgacggacaaagtttattatggctcacgactcgaggatt
gcttgcttcgcgcttacgaccaacgggcagttacttgctacagcgagcaccaagggaact
ttggttcggatattcaacacagttgatggaaatttgcttcaagaggtaaggagaggtgca
gatagagcagagatatacagtttggctttctcatcgactgcccaatggctggcagtgtcc
agtgacaagggtactgtccatgtattcagccttaaagtcaattctggatctcttgggaat
gatatgtctcatcaaaacgattcctctctttctgtggcaccatctggctcctccttttcc
ttcatcaaaggtgtcttgccaaaatatttcaagtcagagtggtctgtggctcagtttcgc
ttgcatgaaggctctcagtatgttgttgcttttggtcatcagaagaatacagtcgtaatc
cttggaatggatggaagcttctaccgatgccaatttgattcagtgaacggaggtgagatg
acacagcttgaatatcacaactttctaatgccagaggaagccttctag

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