Cucurbita moschata (crookneck pumpkin): 111456639
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Entry
111456639 CDS
T05248
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmos03016
]
111456639
Enzymes [BR:
cmos01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
111456639
Transfer RNA biogenesis [BR:
cmos03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111456639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
111456639
NCBI-ProteinID:
XP_022954384
UniProt:
A0A6J1GSU8
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All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MASRCQFWLPKKNRFCANSPINDSKFCGNHSSRADTQWVPCPVDPSHSVLRENLEWHVKR
CPLLKQTQSLAVQPFYQKGINAGEEDSISSDELASGLSDSISSEMKRNIVYGMSGAEFHR
LLAKIRALHGLICKDIQDSYRIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNMEEFGV
LRNYDGGEQCEGNRSCGNEANVAPAVIEFGAGRGYLTQMLADCYGIKRVLLVERKSYKLK
ADRSLRQKESLVLERLRIDIEDLNLNAVESLRHDPYLAIGKHLCGPATDLALRCCLTKQS
NHVNTEQCGDRPKLRGLAIATCCHHLCQWKHYTNKKYLLELGIAKEEFLAITWFTSWAVD
ANHSEDISDVSDSKTFLQSSENEGDGMNGSTVEDIARHMNPVERAVLGFMCKEIIDMGRL
MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICAA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccggtgtcagttttggcttccaaagaagaacagattctgtgcgaattctccc
attaacgattccaagttttgtggtaatcatagctcgagagcggatactcagtgggttcca
tgtcctgtagacccgtctcactctgtgcttcgagaaaatcttgaatggcatgtaaagagg
tgtccgttattgaaacaaactcaatccttggctgtccaaccgttctaccaaaagggcatc
aatgctggggaggaggattcgatatcgtccgatgaactggcttcgggtttgtcagatagc
atttcctctgaaatgaagaggaatatcgtttatggaatgtctggagctgaatttcatcgg
cttcttgcgaagattagagctcttcatggtcttatatgcaaggatattcaagactcttat
aggataaaggaagcttgcaatatgtggattaaaggagaaatagataggaaaattccattt
caagagaaacatgttctgcagcaggcgtcgattcttgggaacatggaggaatttggagtg
ctgaggaattatgatggaggggaacaatgcgagggtaacagatcgtgtggcaatgaggct
aatgttgcccctgcggtaattgagttcggggcaggaagaggctacttaactcaaatgctt
gcggattgctatggtataaaaagggtgcttctggttgagcggaaatcatacaaactgaag
gctgatcgatcactgcgacagaaggagagcttggttttagagcgtttgcgaatcgacatt
gaggatctaaacctgaatgctgttgaatctttgaggcatgatccttacttggctattggc
aaacatctctgtgggcctgcaacagatttggctctcagatgttgtcttaccaaacaatcc
aatcatgtcaatactgaacagtgcggagataggccaaaattgagaggtttggctatagcg
acatgttgtcatcacctttgtcaatggaagcattacacaaataagaaatacttattagaa
ctcggaatcgcaaaagaagaatttcttgctattacatggttcactagttgggcagtggat
gctaatcacagtgaagatatttcagatgtttcagactcgaaaacgtttcttcaatctagt
gaaaacgaaggcgatggaatgaacggaagcacggtagaagacattgctagacatatgaat
ccagtggaaagagcagtcctgggatttatgtgcaaggagattattgatatgggaagacta
atgtggctcaaggaatgtggcttggaaacacagcttgtcaagtatgtcccatctagcatc
tcccctgaaaaccatttacttattgctaaatgcagaaatatttgtgctgcttag
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integrated database retrieval system
