KEGG   Cucurbita moschata (crookneck pumpkin): 111456640
Entry
111456640         CDS       T05248                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111456640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111456640
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     111456640
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 Plasmo_rep
Other DBs
NCBI-GeneID: 111456640
NCBI-ProteinID: XP_022954385
UniProt: A0A6J1GQS2
LinkDB
Position
Unknown
AA seq 381 aa
MSNSKANEGGGNAKRSLPSWMSGKDGGSTSRGKKPNSSCSGQNDVMAEAEEPRQEKVIGE
GPVSSSLHTDFTRLLEGVVFVLSGFVNPERSILRSQALEMGAQYKPDWNSDCTLLICAFP
NTPKFRQVESDCGTIVSKEWISECYAQRKLVDIESYLLHAGKPWRRSNEPREATQGDLEI
PFPTPSKKPQKPVEKNSRLKSHEQEIAQSREIISSRECFSPSKLKKWAIDDYHKTLSWLD
SQEEKPDPSEIKKIAAEGILTCLQDAIDSLHQNQDINQMTEEWKFVPQVVEELAKLRSKK
ESISKEELCRHATDSKRIYEVELNSLLASSPERKKKPPNINKELKNGHKAKEYDSDDTIE
MTEEEIDIAFQKVACKKKRPS
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcgaattcaaaggctaatgagggtggtggcaatgctaagcgaagtcttccttcatgg
atgagtgggaaggacggtgggagtacttctcgaggcaagaaaccaaacagttcttgttct
ggtcaaaatgatgtgatggccgaagctgaagagccgaggcaagagaaagtaattggtgaa
ggcccagtgagcagttcattacacacagatttcaccagacttctggaaggagtagttttc
gtgttgtcaggttttgttaatcccgagcgcagcattctgcggtcccaggcattagaaatg
ggagctcaatataagcccgattggaactcagattgcactttgttgatctgtgctttccca
aataccccaaaatttcgacaagtggaatcagattgcggaacaatagtatcaaaggagtgg
atttcagaatgttatgcacagaggaagctcgttgacattgaaagctacctcctccatgct
ggaaaaccctggagaagaagcaacgaaccacgtgaagccacccaaggtgatttagaaata
ccttttccaacgccatccaagaaacctcagaaaccagttgagaagaattcacgtttaaaa
tcacatgagcaggagatagctcagagtagagagattatttcttcaagagagtgtttttct
ccttcaaaattgaagaagtgggccattgatgattaccataaaacactttcttggctagat
agtcaggaagaaaagccagatccaagtgagataaagaaaatagcagcagaaggaattttg
acttgtttacaagatgccatagattctctacatcaaaatcaggacatcaatcagatgact
gaagaatggaaattcgttcctcaggtggtggaagagctggcaaaacttcgcagtaagaaa
gagtcaatatcaaaggaggaactctgcaggcatgctacagattctaaaaggatttatgaa
gtagaacttaattctctacttgccagttccccagaaagaaagaagaagccgccaaatatc
aataaagaactgaagaatggtcataaagcaaaggaatacgacagtgatgacacgattgag
atgactgaggaggagatagacattgcattccagaaagttgcttgtaagaagaagagacct
agttga

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