KEGG   Cucurbita moschata (crookneck pumpkin): 111456650
Entry
111456650         CDS       T05248                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111456650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmos03019]
    111456650
Messenger RNA biogenesis [BR:cmos03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     111456650
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     111456650
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 111456650
NCBI-ProteinID: XP_022954404
UniProt: A0A6J1GSW8
LinkDB
Position
Unknown
AA seq 128 aa
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDL
YSDIPLGLYVIRGENVVLLGELDLEKEELPPHMTHVSAVEIKRAQKAEREATDLKGTIRK
RLEFLDLD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaagcgcggaagatatctacctttcaacttctcttgccaattaccttgac
aagaaggttctggtactccttcgagatggtcggaagctattagggatactccgttcattc
gatcaatttgcaaatgccgttcttgaaggatcctgtgaaagggtgatcgtcggtgacctt
tacagcgatattcctctaggcctatacgtaattcgaggggagaacgttgttttacttggc
gagctggatttggagaaggaggagctccctccacacatgactcatgtctctgctgtggag
atcaaaagggcccaaaaggcagagagagaggctacagatcttaaaggtacaattaggaaa
aggcttgagtttcttgatctggactga

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