KEGG   Cucurbita moschata (crookneck pumpkin): 111456851
Entry
111456851         CDS       T05248                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cmos04812]
    111456851
Cytoskeleton proteins [BR:cmos04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     111456851
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_IFT122_1st eIF2A WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_VPS8 Beta-prop_WDR19_1st Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 111456851
NCBI-ProteinID: XP_022954653
UniProt: A0A6J1GRP5
LinkDB
Position
Unknown
AA seq 990 aa
MAKRGYKLQEIAAHSANVNCLSIGKKACRLFITGGDDHKVNLWAIGKPNSLMSLCGHTNP
VESVAFDSSEVLVLGGASSGAIKLWDLEEAKIVRTLSGHRSNCTAVEFHPFGEFFASGSR
DTNLKIWDIRKKGCSHTYKGHTQGISTIKFTPDGRWVVSGGFDSAVKVWDLTAGKLLHDF
KFHEGHIRSIGFHPLEFLLATGSADKTVKFWDLETFELIGSTRPEATGVRAITFHPDGRT
LFSGLDESLKVYSWEPVICHDSVDMGWSTLGDLCIHDGKLLSCSFYRSSVGVWVADISNI
EPYGASSVSGQKQPKEQKSNSAFKNSLASKSFGAGLMTSNLQSLSPDYETKEIKNIYIDT
TGGKPEAASLSSPKVVFALGSKEIIYDASKKQSPASRVETKSIEVSTVKPPVVPCDSPEV
KDSASSIRESITFSKTRRGMLLRPAHVRKPSNSKMDLENLSVSVDSSRKTDLERLAVVDS
VNICHTTNDLNKAPEPNFVTRVVSEETQKDSHRINSDIRSIETFENIPRVSSETTSEQES
CNKPVVSRKGTNSVKFVNGVAVVPGRTRTLVEKFERREQTIDVQTTISPSYVLESEKTKE
QTNSYEAQVVTPQILETEKSLEQANTYGVQAVAIPSHVSETEKARERTNNYEMQAVTIPS
HISETEKARERTNNYEMQAVMIPSHISETEKARERTNNYEMQAVTIPSHISETEKARERA
NNYEMQAVIIPSRISETEKARERTNNYEVRAMITPRTPETKRMTTNYEARTINNYEARTR
NNYEAMTTPVTSPVPETDKTDNLQKGEPQASGRDSPCANDRDVIEDIMQSHDVFLSSLRS
RLTKLQVVRHFWQQNDMKGAINAMTKLPDHSVQADVISVLIEKMNVLTLDLFSCLLPVLV
GLLDSKIERHASLSMEILLKLVAVFGHVITSAVSAPPVVGVDLHAEQRVLCCKQCFTHLQ
KIQKILPSFARRGGSLARSAQELNLVLQQC
NT seq 2973 nt   +upstreamnt  +downstreamnt
atggcgaagcgtggatataagctacaggaaattgcggcacactcggctaatgtaaactgt
ctgagtattgggaaaaaagcttgccgattgttcataactggtggagatgatcacaaagtc
aatctttgggcgattggaaaacccaactctttgatgagtctgtgtggtcatactaatcct
gtcgaatcggtagcttttgattcatctgaagttttggtgcttggtggagcttcttctggt
gcaataaagttatgggatcttgaagaggctaaaatagttcgcactctttctggtcacaga
tcgaattgcacagcagttgagtttcatccattcggcgagttctttgcatcaggttctaga
gacactaatcttaaaatctgggatatccgaaagaaaggttgcagtcacacatacaagggt
cacactcaaggcattagtacgatcaagttcacgccagatggtcgctgggtggtctccggt
ggatttgatagtgctgtgaaggtatgggatctaactgctggaaagctcttacatgatttt
aagttccatgaagggcatattcggtccataggttttcatccactcgagtttctccttgcg
acagggtcagctgacaaaactgtaaagttctgggatttggaaacctttgaattgattgga
tcaacaagacctgaggctactggagttcgtgcaatcaccttccacccggatgggaggacc
ctgttttctggtctggatgaaagtttgaaggtatattcatgggagcctgtcatttgtcat
gactctgtcgatatgggatggtcaacacttggtgacctttgcattcatgatgggaaactt
ttgagttgctcattttatcgaagctctgttggagtttgggtagctgacatatcgaatatt
gagccttatggagctagttcagtatctgggcaaaagcagccaaaagaacagaaatctaat
tctgctttcaagaacagtttagcttcaaaaagctttggagctggtttgatgacttcaaat
ttacaatctctgtctcctgattatgaaaccaaggagataaagaatatatacatagacacc
accggtggaaagcctgaggcggcatctttaagctccccaaaagttgtatttgcattgggt
tcaaaggagattatctatgatgcaagcaaaaagcaaagtcctgcatcaagagtagaaacg
aaatctattgaagtatcaacggtcaaacccccggttgtaccttgtgatagtcctgaggtt
aaagactccgcaagctctataagggaatctatcacattttccaagacaagacgtggtatg
ttactcagaccagctcatgtaagaaagccatcaaatagtaaaatggatcttgaaaaccta
tcagtgtcagttgattcaagtagaaaaactgatcttgagagactagcagttgtagattct
gtaaatatctgtcataccaccaatgatttgaataaagctccagaaccgaacttcgtaaca
cgggttgtatcggaagaaacacaaaaagattctcatagaataaattctgatatcagaagt
atcgagacgtttgaaaacattccccgtgtgtcttctgagacaacttcagaacaagaaagc
tgcaacaaaccagttgttagtagaaaagggacaaactctgttaaatttgtaaatggagtt
gcagttgttcctggaaggacacgcactcttgtcgagaagttcgaaaggagagaacaaact
attgatgtacagacgacaatttcaccatcttatgtcctcgaatcggaaaagacaaaggag
caaactaatagctatgaagcacaggtggtaactcctcagatccttgaaactgagaagtca
ctcgaacaagctaatacctatggagtacaggcagtggctataccttctcacgtctccgaa
acagagaaggcgcgtgaacgaactaataactacgaaatgcaggcagtgacgattccttcg
cacatctctgaaactgagaaggcaagagaacgaactaataactacgaaatgcaggcagtg
atgattccttcgcacatctctgaaactgagaaggcaagagaacgaactaataactacgaa
atgcaggcagtgacgattccttcgcacatctctgaaactgagaaggcaagagaacgagct
aataactatgaaatgcaggcagtgattattccttcgcgcatctctgaaactgagaaggca
agagaacgaactaataactatgaagtacgagcaatgattactcctcgtaccccagaaact
aagaggatgactactaactatgaagcaagaacaataaataactatgaagcaagaacaaga
aataactatgaagcaatgacaactcctgtcacttctcctgtccctgaaacggataaaaca
gacaatttacagaaaggagaacctcaagcttctggaagagattctccctgtgcaaatgat
agggatgtcattgaagacataatgcaatctcatgatgtattcttaagtagccttcgatcc
cggttgacaaaactgcaggtggtacgacacttttggcagcagaatgacatgaaaggtgcc
atcaatgccatgacaaaactcccggatcattctgtgcaagcagatgtgatcagcgttctc
atcgagaagatgaatgtcctgactctagatttattctcgtgcctacttcccgtactcgtg
ggtttattggatagcaagatagaaaggcatgccagtttgtccatggagattctcttgaag
cttgtagcagtttttggtcatgttataacctcagcagtatcagcacctccagtagttggt
gttgatcttcatgcagagcagagggtactttgctgcaagcaatgcttcacccatctgcag
aagattcaaaaaattcttccatcatttgcaaggagaggtggttcactagcaagaagtgct
caagaattgaatctggtacttcaacaatgttaa

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