Cucurbita moschata (crookneck pumpkin): 111456984
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Entry
111456984 CDS
T05248
Name
(RefSeq) U3 snoRNP-associated protein-like YAO
KO
K14793
ribosomal RNA-processing protein 9
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmos03009
]
111456984
Ribosome biogenesis [BR:
cmos03009
]
Eukaryotic type
90S particles
Other 90S particles
111456984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
111456984
NCBI-ProteinID:
XP_022954839
UniProt:
A0A6J1GS27
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MKKNVKKNSSAPPRGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNAFVDEG
AENEEFEEETADEKRKRLANEYLEKIREIARRGKEREDEEKDDDDDDDDDDDDESGDEGG
KDSLVAQILQQEQLEDSGRVRREIASRVLKPEARDGFQVLIKHRQSVTAVALSDDDMKGF
SSSKDGTILHWDVDCGKEEKYQWPSYEVLKSHGVKDPQGRAARHSKVTLSLAVSSDGRYL
ASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNVEDRA
YINTLFGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISN
DEFLTGSDDGSIELWTALKKKPVYIVRNAHPSSLSCTNLEPKENGAIPNGCMGNGNANLN
TSHSLSAHSWVSSVSVCRNSDLAASGAGNGFVRLWALGSDKKDVRPLYDLPLVGFLNSLT
FANSGRFVVAGVGQEPRLGRWGRIPAARNGVAVHPLKLP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaacgtgaagaagaatagctcggctcctcctagaggggcaaagaaggggaag
aattttccactcagtaaggatccttttttcagttctgaatcgaggaaacggaggaagatt
gttgatgatgagattgagagcggtgaatctgatgaggataatgcgttcgtggacgaaggt
gctgagaatgaggagtttgaggaagaaactgctgatgagaaaaggaagagattagcaaac
gagtacttggagaaaattcgggaaattgcgaggagaggtaaggagagggaagatgaagag
aaggatgatgatgatgatgatgatgatgatgatgatgatgagagtggtgacgaaggcgga
aaggattcacttgttgcacaaatccttcagcaagaacaactggaagatagcggaagggtt
cggagagaaattgcatcaagggttctgaagccagaagctagagatggatttcaagtcttg
attaagcatagacaatctgttacagctgtggctctatccgatgatgatatgaaggggttt
tcatcgtctaaggatggtacgatcttacactgggatgtagattgtggtaaagaggaaaaa
tatcaatggcccagttatgaagtattgaagtcgcatggtgttaaggatccccaaggtcgg
gctgcaagacatagtaaagtcactttgtcgttagcagtcagttctgatggtcgatatttg
gcaagtggaggcttagaccgccatgtgcatatatgggatacacgtacaagagagcatatt
caggcatttcctggtcataggggacctgtctcgtgtttgactttcaggcaagggacctca
gaacttttttctggttcatttgatcgaactgtcaagatatggaatgtagaagacagagct
tacataaatacattatttggtcaccaaagtgaagtattaactatcgattgcttacggaag
gaaagattgcttactgttggacgtgatcggagtatgcaattatggaaggtcccagaggag
tcccgtttagtatttcgtgcacctgcatcatccttagagtgttgctgttttataagcaat
gatgagttcttaactggatcagatgacggcagtattgagctttggactgcattaaaaaag
aagcctgtttatattgtacgaaatgctcatccttcttcattgtcttgcactaatttggag
ccaaaggaaaatggtgccatccccaatggttgtatgggaaatgggaatgctaatcttaat
acttctcatagtttgtcagcacactcttgggtaagttcagtctcagtatgtagaaacagt
gaccttgctgcatcaggtgctggcaatggttttgttcgtttatgggctctcggaagtgat
aagaaagatgtgcgaccattatatgaccttcctctggttgggtttttgaactccttgact
tttgccaattctggaaggttcgtggtagctggagttgggcaggaacctcgtctaggaaga
tggggtcgaatcccagctgctcggaacggagttgcagttcatccccttaaactcccatga
DBGET
integrated database retrieval system
