Cucurbita moschata (crookneck pumpkin): 111457039
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Entry
111457039 CDS
T05248
Name
(RefSeq) cullin-4-like
KO
K10609
cullin 4
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03420
Nucleotide excision repair
cmos04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111457039
09124 Replication and repair
03420 Nucleotide excision repair
111457039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmos04121
]
111457039
03400 DNA repair and recombination proteins [BR:
cmos03400
]
111457039
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmos04147
]
111457039
Ubiquitin system [BR:
cmos04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
111457039
DNA repair and recombination proteins [BR:
cmos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111457039
TCR (transcription coupled repair) factors
Cul4-CSA complex
111457039
Exosome [BR:
cmos04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111457039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
111457039
NCBI-ProteinID:
XP_022954928
UniProt:
A0A6J1GSH7
LinkDB
All DBs
Position
Unknown
AA seq
835 aa
AA seq
DB search
MSLPTKRSATPTANTAASSVVSSSPTSTASISSPPMKKTKSQPLSTSLDPNKNGLHHLDR
PSSNITSSALVDDADFDPSSMALDEDLKPDDSPLIGTSRAVATNLSRKKATLPQPAKKLV
IKLVKAKPTLPANFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAVNDLCLHKMGGNLYR
RIEKECELHISAALQSLVGQSPDLVVFLAYVEKCWQDFCDQMLMIRGIALYLDRTYVKQT
PNVCSLWDMGLQLFRKHLSLSSEVEHKTVTGLLRMIEKERLGEAVNRTLLNHLLKMFTAL
GIYSESFEKPFLEYTSEFYAAEGMKHMQQSDVSEYLKHAEGRLQAEQDRCLHYLDSSTRK
PLIATTERQLLERHISAILDKGFTLLMDGNRMGDLLRMYNLISRVNALESLRQALSSYIR
RTGQNIVMDDEKDKDMVPSLLEFKASLDTIWEESFSKNEAFCNTIKDSFEHLINLRQNRP
AELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGK
SASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPMGIEMS
VHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWHNSLGHCVLKAEFPK
GRKELAVSLFQTVVLMLFNDAEKLSFQDIRESTGIEDKELRRTLQSLACGKVRVLQKIPK
GRDVEDHDSFVFNEVFTAPLYRLKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIM
KTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgctctgctacccccaccgccaacaccgccgccagctccgtc
gtctcttcttcacccacttccaccgcctccatctcttcccctcctatgaagaaaaccaaa
tcccaacctctttccacctccctcgaccccaacaagaatggcctccaccacctcgaccgc
ccttcttccaacattacttcctccgccctcgtcgatgacgccgatttcgacccttcctcc
atggccctagatgaagatctcaagcccgacgactcccctctcattggcactagccgcgcc
gtcgccaccaatttgtcgcggaagaaagctactcttcctcagcctgccaagaaacttgtc
atcaagcttgtcaaagcaaaaccgaccctccctgctaattttgaggaggatacatgggca
aagttgaaatcagccatatgtgctatattcttgaagcaacctaattcttgtgatctcgag
aagctttatcaggctgttaatgatctttgcttgcacaaaatgggtggaaacctttatcgg
cggattgagaaggagtgtgaactgcacatatctgcagcattacagtctttggttgggcaa
agcccagatttggtggttttcttggcatatgtggagaaatgttggcaagatttttgtgat
cagatgttgatgattcgtggcattgccctgtatctggacaggacgtatgtcaaacaaaca
ccaaatgtgtgctcattatgggacatgggcttgcaacttttcagaaaacatctatcttta
tcttcagaagtcgagcacaagacagttactggtctattaagaatgattgagaaagaaagg
ctaggtgaagcagttaatcggactctcctcaaccaccttttgaagatgtttactgcgcta
ggaatttactcagagagctttgaaaagccattccttgaatacacttcggagttttatgct
gctgaaggcatgaaacacatgcagcagtcagacgtttcagaatatttaaagcatgcagag
gggaggttgcaggcagagcaagatagatgtttgcactaccttgattcaagtacaagaaag
ccactgatagcaactacagaaagacaactccttgaacgtcatatatctgcaattcttgat
aagggttttacattgctgatggatgggaatcgtatgggagaccttctgagaatgtacaac
cttatttcaagggtcaatgcccttgaatcactaagacaagcccttagctcatatatacga
agaactgggcaaaatattgtcatggatgatgagaaggacaaggatatggtcccatcgctt
ttagaatttaaggcttctcttgatacaatatgggaagaaagtttttccaagaatgaagct
ttttgcaatacgataaaggattcgtttgagcatctgattaatcttcgtcagaatcgtcct
gccgaactgattgcaaagtttcttgatgaaaaactccgtgctggaaataagggtacgtct
gaagaagaattggagggtaccctggacaaagtgttggttctgttcaggtttattcagggc
aaagatgtgtttgaagccttttacaagaaggatctagcgaagaggcttcttctaggaaag
agtgcttccattgatgcagagaagtctatgatctccaaacttaagaccgagtgtggtagt
cagtttacaaacaaacttgaaggaatgtttaaggacatagaattgtctaaagagatcaat
gaatctttcaagcaatcatcccaagcgaggacaaagctccccatggggattgaaatgagt
gttcatgtcttaactactgggtattggccaacttatcctcccatggacgttaggcttccc
cacgaattgaatgtctaccaggacattttcaaagagttctatttgagcaagtacagtggg
agacgcttaatgtggcataattcattaggccactgtgtgttgaaagctgagttcccaaaa
ggtagaaaagagttggccgtttccctttttcagaccgtggttttaatgcttttcaacgac
gctgagaagctcagttttcaagacattagagaatctactggaattgaggataaagaactc
aggaggactttacaatcacttgcctgtggaaaagttagagtactgcaaaagatacccaaa
ggtagagacgtggaggaccatgattcgttcgtgttcaatgaagtgtttactgctcccctc
taccgtcttaaggtcaatgcaattcagatgaaggaaacagtagaagagaataccagcaca
actgaaagagtctttcaggaccgtcaatatcaggttgatgccgctattgttcgaataatg
aaaacccgaaaagtgttgagtcacacccttctgataactgaactattccaacagttaaag
tttccaataaagccagcggatttgaagaagcggattgaaagtcttatcgatagagagtac
ctagaacgtgacaagagcaacccacagatatacaattaccttgcctaa
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