KEGG   Cucurbita moschata (crookneck pumpkin): 111457039
Entry
111457039         CDS       T05248                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
cmos  Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03420  Nucleotide excision repair
cmos04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cmos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111457039
  09124 Replication and repair
   03420 Nucleotide excision repair
    111457039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cmos04121]
    111457039
   03400 DNA repair and recombination proteins [BR:cmos03400]
    111457039
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cmos04147]
    111457039
Ubiquitin system [BR:cmos04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     111457039
DNA repair and recombination proteins [BR:cmos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      111457039
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      111457039
Exosome [BR:cmos04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   111457039
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 111457039
NCBI-ProteinID: XP_022954928
UniProt: A0A6J1GSH7
LinkDB
Position
Unknown
AA seq 835 aa
MSLPTKRSATPTANTAASSVVSSSPTSTASISSPPMKKTKSQPLSTSLDPNKNGLHHLDR
PSSNITSSALVDDADFDPSSMALDEDLKPDDSPLIGTSRAVATNLSRKKATLPQPAKKLV
IKLVKAKPTLPANFEEDTWAKLKSAICAIFLKQPNSCDLEKLYQAVNDLCLHKMGGNLYR
RIEKECELHISAALQSLVGQSPDLVVFLAYVEKCWQDFCDQMLMIRGIALYLDRTYVKQT
PNVCSLWDMGLQLFRKHLSLSSEVEHKTVTGLLRMIEKERLGEAVNRTLLNHLLKMFTAL
GIYSESFEKPFLEYTSEFYAAEGMKHMQQSDVSEYLKHAEGRLQAEQDRCLHYLDSSTRK
PLIATTERQLLERHISAILDKGFTLLMDGNRMGDLLRMYNLISRVNALESLRQALSSYIR
RTGQNIVMDDEKDKDMVPSLLEFKASLDTIWEESFSKNEAFCNTIKDSFEHLINLRQNRP
AELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGK
SASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPMGIEMS
VHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWHNSLGHCVLKAEFPK
GRKELAVSLFQTVVLMLFNDAEKLSFQDIRESTGIEDKELRRTLQSLACGKVRVLQKIPK
GRDVEDHDSFVFNEVFTAPLYRLKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIM
KTRKVLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKSNPQIYNYLA
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgtctctccccaccaaacgctctgctacccccaccgccaacaccgccgccagctccgtc
gtctcttcttcacccacttccaccgcctccatctcttcccctcctatgaagaaaaccaaa
tcccaacctctttccacctccctcgaccccaacaagaatggcctccaccacctcgaccgc
ccttcttccaacattacttcctccgccctcgtcgatgacgccgatttcgacccttcctcc
atggccctagatgaagatctcaagcccgacgactcccctctcattggcactagccgcgcc
gtcgccaccaatttgtcgcggaagaaagctactcttcctcagcctgccaagaaacttgtc
atcaagcttgtcaaagcaaaaccgaccctccctgctaattttgaggaggatacatgggca
aagttgaaatcagccatatgtgctatattcttgaagcaacctaattcttgtgatctcgag
aagctttatcaggctgttaatgatctttgcttgcacaaaatgggtggaaacctttatcgg
cggattgagaaggagtgtgaactgcacatatctgcagcattacagtctttggttgggcaa
agcccagatttggtggttttcttggcatatgtggagaaatgttggcaagatttttgtgat
cagatgttgatgattcgtggcattgccctgtatctggacaggacgtatgtcaaacaaaca
ccaaatgtgtgctcattatgggacatgggcttgcaacttttcagaaaacatctatcttta
tcttcagaagtcgagcacaagacagttactggtctattaagaatgattgagaaagaaagg
ctaggtgaagcagttaatcggactctcctcaaccaccttttgaagatgtttactgcgcta
ggaatttactcagagagctttgaaaagccattccttgaatacacttcggagttttatgct
gctgaaggcatgaaacacatgcagcagtcagacgtttcagaatatttaaagcatgcagag
gggaggttgcaggcagagcaagatagatgtttgcactaccttgattcaagtacaagaaag
ccactgatagcaactacagaaagacaactccttgaacgtcatatatctgcaattcttgat
aagggttttacattgctgatggatgggaatcgtatgggagaccttctgagaatgtacaac
cttatttcaagggtcaatgcccttgaatcactaagacaagcccttagctcatatatacga
agaactgggcaaaatattgtcatggatgatgagaaggacaaggatatggtcccatcgctt
ttagaatttaaggcttctcttgatacaatatgggaagaaagtttttccaagaatgaagct
ttttgcaatacgataaaggattcgtttgagcatctgattaatcttcgtcagaatcgtcct
gccgaactgattgcaaagtttcttgatgaaaaactccgtgctggaaataagggtacgtct
gaagaagaattggagggtaccctggacaaagtgttggttctgttcaggtttattcagggc
aaagatgtgtttgaagccttttacaagaaggatctagcgaagaggcttcttctaggaaag
agtgcttccattgatgcagagaagtctatgatctccaaacttaagaccgagtgtggtagt
cagtttacaaacaaacttgaaggaatgtttaaggacatagaattgtctaaagagatcaat
gaatctttcaagcaatcatcccaagcgaggacaaagctccccatggggattgaaatgagt
gttcatgtcttaactactgggtattggccaacttatcctcccatggacgttaggcttccc
cacgaattgaatgtctaccaggacattttcaaagagttctatttgagcaagtacagtggg
agacgcttaatgtggcataattcattaggccactgtgtgttgaaagctgagttcccaaaa
ggtagaaaagagttggccgtttccctttttcagaccgtggttttaatgcttttcaacgac
gctgagaagctcagttttcaagacattagagaatctactggaattgaggataaagaactc
aggaggactttacaatcacttgcctgtggaaaagttagagtactgcaaaagatacccaaa
ggtagagacgtggaggaccatgattcgttcgtgttcaatgaagtgtttactgctcccctc
taccgtcttaaggtcaatgcaattcagatgaaggaaacagtagaagagaataccagcaca
actgaaagagtctttcaggaccgtcaatatcaggttgatgccgctattgttcgaataatg
aaaacccgaaaagtgttgagtcacacccttctgataactgaactattccaacagttaaag
tttccaataaagccagcggatttgaagaagcggattgaaagtcttatcgatagagagtac
ctagaacgtgacaagagcaacccacagatatacaattaccttgcctaa

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