Cucurbita moschata (crookneck pumpkin): 111457080
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Entry
111457080 CDS
T05248
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos00040
Pentose and glucuronate interconversions
cmos01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111457080
Enzymes [BR:
cmos01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111457080
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111457080
NCBI-ProteinID:
XP_022954990
UniProt:
A0A6J1GTX4
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MRELDSNIAGAKLLLLLIFAFAIIFPSLEAGIADFDEVWQQRAQEAKKAALEAYQPRPEE
VTESFNEHVNGDLDDANNTRRHLRKYNGPCLATNPIDRCWRCDKNWSKNRKKLADCALGF
GRGTTGGKNGRFYIVQDSSDNDMLHPKPGTLRYAVIQDRPLWITFAHDMVIRLAEELIMT
DNKTLDGRGANVHIANGGQITLQFVKNIIIHNLHIHDIKAGNGGLIRDSVNHYGIRTRSD
GDGISMFGASNVWIDHVSMSNCQDGLIDAVMASTAITISNCHFAHHNDVILLGASDSHSD
DQIMQVTLAFNHFGKGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSRNPTIISQGNRFI
APPDPNCKEVTKRVYAPESEWKTWNWRSEGDLLMNGAFFVQSGNPIRKYSKKDVIHAKPG
TFVTRLTRFAGPLKCIRNKPC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagagagctagatagcaacatcgctggggctaagctgctgctgctgctgatatttgct
tttgctatcatttttccatcccttgaggctggtattgcagattttgatgaagtatggcag
caaagagctcaagaagccaagaaggctgccttggaggcctaccaaccccgtcctgaagag
gtcactgagagtttcaatgagcatgttaacggagacttagatgatgcaaataacacaagg
agacatttgaggaaatacaatggtccatgtttagctacaaatccaattgatagatgctgg
agatgtgacaaaaactggtctaaaaaccgtaagaagctagctgattgtgcgctcgggttc
ggccgaggaacaacaggaggcaaaaatggaagattttacatcgttcaagattcgagcgat
aacgacatgcttcatcctaaacccggaactctccgctatgccgtgatccaagacagacca
ctttggattacatttgcacatgacatggtgatcaggctagctgaagagcttataatgact
gataacaagacattagatggacgtggtgccaatgtccatatagctaatggtggtcaaatt
actttgcaatttgtgaagaacataatcatccataatttgcatattcatgacatcaaagct
ggcaatggaggccttattcgagactcggtgaaccattacgggattcgaacacggagtgat
ggcgacgggatctccatgtttggagcttcgaatgtttggatagatcatgtttcgatgtct
aattgtcaagacggactaatcgatgcagtcatggcgtcgactgctatcaccatttcgaac
tgccatttcgctcaccataacgatgtgatattattaggggcaagtgatagccactcggat
gaccagattatgcaggtaacgcttgcatttaatcactttggtaaagggttggtgcagagg
atgcctagatgccgatgggggttcgtccatgtggtcaataatgactacactcattggctt
atgtatgccatcggtggcagccgcaaccccaccattatcagccaggggaaccgtttcatt
gccccaccagacccaaattgcaaagaggtgacgaaaagggtatatgcaccagaaagcgaa
tggaaaacatggaattggagatcagaaggagatctgctgatgaatggagctttctttgta
caatctgggaaccccataagaaaatactcaaagaaagatgtgatccatgcaaaaccagga
acatttgtgacaaggctcacacggttcgcagggcctctaaaatgcataaggaacaaaccc
tgttaa
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