Cucurbita moschata (crookneck pumpkin): 111457086
Help
Entry
111457086 CDS
T05248
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
cmos
Cucurbita moschata (crookneck pumpkin)
Pathway
cmos03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cmos00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111457086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmos03019
]
111457086
03012 Translation factors [BR:
cmos03012
]
111457086
Messenger RNA biogenesis [BR:
cmos03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111457086
Translation factors [BR:
cmos03012
]
Eukaryotic type
Release factors
111457086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
EF-G_D2
G-alpha
WD40_alt
Motif
Other DBs
NCBI-GeneID:
111457086
NCBI-ProteinID:
XP_022954997
UniProt:
A0A6J1GSQ3
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDIEEDIRALELDSPDVNGVPKPDEKMENIVKSDNVEEDAKTEDIEKSDKMEEEWRTEDH
PQSAQDIHVEEQVEESISAKEKEVSSTVNEDEGDLEMDRKRHLNVVFIGHVDAGKSTIGG
QILFLSNQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETT
RFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVLLAKTLGV
AKLLVVVNKMDEPTVKWSKERYEEIESKMAPFLKSSGYNVKKDVQFLPISGLHGINMKAR
VDKKVCPWWNGPCLFEILDTIEGPPRNPKDPFRMPIIDKFKDMGTTVMGKVESGTVREGD
SLWVMPNKTQVKVAAVMCDENKVKWAGPGENLRVRITGIEEEEITSGFVLSSVAKPIAAV
SEFVAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIIELLHQIDPKTRKPMKKKVLFVK
NGAVILCRIQVNNFICIEKFSDFPQLGRFTLRTEGKTVAVGKVTDIPAATN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaggaggatattcgtgcattagaacttgattcaccagatgttaatggtgtt
cctaaaccagatgaaaagatggaaaatattgtgaaatccgacaatgttgaagaagatgca
aagacagaagatattgagaagtccgataaaatggaagaagagtggaggacagaggaccat
cctcaatcggcccaagatatccacgttgaagaacaagtggaggagagcatatctgcaaag
gagaaggaagtttcttcgactgtaaatgaggatgaaggggatttggaaatggatcgcaaa
agacacttgaatgttgtgttcattggtcatgttgatgctggtaagtctacaattggtggt
cagatacttttccttagcaatcaggttgacgagcgtacgatccaaaagtacgaaaaagaa
gcaaaggataaaagcagagaaagctggtatatggcatatatcatggacacaaatgaagag
gagagagtcaaggggaaaactgttgaagtgggaagagcacattttgaaactgagaccaca
aggtttacaattttggatgctccaggtcacaaaagttatgtcccaaatatgatcagcggg
gcatctcaagctgatataggggttctggtaatttctgctaggaaaggagagtttgaaact
ggatatgagagaggtggacaaactcgtgagcatgttttgctggcaaaaacgttgggtgtt
gcgaagcttctcgttgtagtgaataagatggatgaacccacagtcaaatggtccaaagaa
aggtatgaggagatagagtctaagatggcacccttcttaaagtcatctggttacaatgtg
aagaaagatgtccaatttttacctatatctggtcttcatggtattaacatgaaagcaaga
gtggataagaaagtatgtccgtggtggaatggtccgtgcttgtttgaaatccttgatacg
attgaaggtccaccaagaaatccaaaagatccatttaggatgcccatcatcgacaaattc
aaggacatgggaacgactgtcatgggtaaagttgaatctggcactgtgcgtgagggtgat
tccttatgggtaatgccaaataagactcaggtgaaagttgctgctgtgatgtgtgatgaa
aataaagttaagtgggcaggacctggcgaaaatcttcgtgttagaataactggaattgaa
gaagaagaaataacgtctgggtttgtactatcaagcgttgcaaaaccaatagccgctgtt
tctgagtttgttgcgcagttgcagattcttgaactgctggataatgcaatatttaccgct
ggatataaggccgtacttcacattcatgctgttgttgaagaatgtgagatcatagagctg
ctacatcagattgatccgaagactaggaaacctatgaaaaagaaagttctctttgtaaaa
aatggtgcagttattttgtgccgcatccaggtcaataacttcatctgcattgagaagttc
tctgattttcctcagcttggaagatttacacttcggactgaagggaagacagttgccgta
ggaaaggtcactgatattccggctgcaaccaattaa
DBGET
integrated database retrieval system
